FFCP PHASE1:Hg19::chr5:38557323..38557328,-: Difference between revisions
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|id=chr5:38557323..38557328,-
|short_description=p12@LIFR
|description=CAGE_peak_12_at_LIFR_5end
|association_with_transcript=238bp_to_ENST00000511561_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3977 | |EntrezGene=3977 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6597 | |HGNC=6597 | ||
|TSSclassifier=strong | |||
|UniProt=D6RJ94 | |UniProt=D6RJ94 | ||
|association_with_transcript=238bp_to_ENST00000511561_5end | |||
|cluster_id=chr5:38557323..38557328,- | |||
|coexpression_cluster_id=C2670 | |||
|description=CAGE_peak_12_at_LIFR_5end | |||
|id=chr5:38557323..38557328,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.24e-10;29!UBERON:0001041;6.52e-10;30!UBERON:0005795;5.73e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.76e-35!115;UBERON:0006947!3.29e-14!3;UBERON:0004054!3.29e-14!3;UBERON:0005904!9.10e-11!4;UBERON:0003135!5.88e-10!11;UBERON:0003127!9.81e-10!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.23e-66;1!UBERON:0002171;4.66e-66;1!UBERON:0006518;4.66e-66;1!UBERON:0008949;4.66e-66;1!UBERON:0000101;4.66e-66;1!UBERON:0002167;4.66e-66;1!UBERON:0002048;4.26e-13;22!UBERON:0000117;4.26e-13;22!UBERON:0000171;4.26e-13;22!UBERON:0000170;4.26e-13;22!UBERON:0005178;5.81e-08;34!UBERON:0002224;5.81e-08;34!UBERON:0000065;2.60e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.23e-66,1;UBERON:0002171,4.66e-66,1;UBERON:0006518,4.66e-66,1;UBERON:0008949,4.66e-66,1;UBERON:0000101,4.66e-66,1;UBERON:0002167,4.66e-66,1;UBERON:0002048,4.26e-13,22;UBERON:0000117,4.26e-13,22;UBERON:0000171,4.26e-13,22;UBERON:0000170,4.26e-13,22;UBERON:0005597,4.26e-13,22;UBERON:0000118,4.26e-13,22;UBERON:0005178,7.08e-09,34;UBERON:0002224,7.08e-09,34;UBERON:0005181,1.18e-08,35;UBERON:0005153,3.03e-08,37;UBERON:0008947,4.68e-08,38;UBERON:0003258,4.68e-08,38 | |||
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| ||
|short_description=p12@LIFR | |||
}} | }} |
Latest revision as of 20:23, 17 September 2015
Short description: | p12@LIFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_LIFR_5end |
Coexpression cluster: | C2670_uterus_lung_cervix_adipose_penis_ductus_seminal |
Association with transcript: | 238bp_to_ENST00000511561_5end |
EntrezGene: | LIFR |
HGNC: | 6597 |
UniProt: | D6RJ94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.23e-66 | 1 |
lower lobe of right lung | 4.66e-66 | 1 |
right lung lobe | 4.66e-66 | 1 |
lower lobe of lung | 4.66e-66 | 1 |
lobe of lung | 4.66e-66 | 1 |
right lung | 4.66e-66 | 1 |
lung | 4.26e-13 | 22 |
respiratory tube | 4.26e-13 | 22 |
respiration organ | 4.26e-13 | 22 |
pair of lungs | 4.26e-13 | 22 |
lung primordium | 4.26e-13 | 22 |
lung bud | 4.26e-13 | 22 |
thoracic cavity element | 7.08e-09 | 34 |
thoracic cavity | 7.08e-09 | 34 |
thoracic segment organ | 1.18e-08 | 35 |
epithelial bud | 3.03e-08 | 37 |
respiratory primordium | 4.68e-08 | 38 |
endoderm of foregut | 4.68e-08 | 38 |