FFCP PHASE1:Hg19::chr5:31936389..31936400,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:31936389..31936400,+
|short_description=p11@PDZD2
|description=CAGE_peak_11_at_PDZD2_5end
|association_with_transcript=131bp_to_ENST00000513852_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23037 | |EntrezGene=23037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18486 | |HGNC=18486 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=131bp_to_ENST00000513852_5end | |||
|cluster_id=chr5:31936389..31936400,+ | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_11_at_PDZD2_5end | |||
|id=chr5:31936389..31936400,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.46e-50;1!CL:0000159;4.32e-26;2!CL:0002623;9.45e-18;3!CL:0000622;3.26e-11;5!CL:0000154;1.44e-09;6!CL:0000150;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.46e-50,1;CL:0000159,4.32e-26,2;CL:0002623,9.46e-18,3;CL:0000622,3.26e-11,5;CL:0000154,1.44e-09,6;CL:0000150,8.37e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.46e-50;1!DOID:1325;2.18e-08;7!DOID:3904;2.18e-08;7 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.46e-50,1;DOID:1325,2.35e-08,7;DOID:3904,2.35e-08,7 | |||
|ontology_enrichment_uberon=UBERON:0002780!6.17e-22!41;UBERON:0001890!6.17e-22!41;UBERON:0006240!6.17e-22!41;UBERON:0003080!2.61e-21!42;UBERON:0001049!4.09e-20!57;UBERON:0005068!4.09e-20!57;UBERON:0006241!4.09e-20!57;UBERON:0007135!4.09e-20!57;UBERON:0007023!2.86e-19!115;UBERON:0002616!2.98e-19!59;UBERON:0001950!1.06e-18!20;UBERON:0000955!3.99e-17!69;UBERON:0006238!3.99e-17!69;UBERON:0005743!4.30e-17!86;UBERON:0002619!7.82e-17!22;UBERON:0002791!1.09e-16!33;UBERON:0001017!1.38e-16!82;UBERON:0002020!3.55e-16!34;UBERON:0003528!3.55e-16!34;UBERON:0001893!4.16e-16!34;UBERON:0003056!5.63e-15!61;UBERON:0000073!6.89e-15!94;UBERON:0001016!6.89e-15!94;UBERON:0000956!1.42e-14!25;UBERON:0000203!1.42e-14!25;UBERON:0000033!1.60e-14!123;UBERON:0003075!3.30e-14!86;UBERON:0007284!3.30e-14!86;UBERON:0000153!1.63e-13!129;UBERON:0007811!1.63e-13!129;UBERON:0002346!2.55e-13!90;UBERON:0001869!6.49e-13!32;UBERON:0004121!2.38e-10!169;UBERON:0002771!3.49e-10!3;UBERON:0000924!6.10e-10!173;UBERON:0006601!6.10e-10!173;UBERON:0001871!1.03e-09!7;UBERON:0000200!1.05e-08!6;UBERON:0003296!3.04e-08!4;UBERON:0010133!3.04e-08!4;UBERON:0000007!6.68e-08!2;UBERON:0001894!8.80e-08!7;UBERON:0006222!8.80e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.46e-50;1!UBERON:0004909;4.32e-26;2!UBERON:0001044;1.44e-09;6!UBERON:0003293;1.44e-09;6!UBERON:0003294;1.44e-09;6!UBERON:0010047;1.44e-09;6!UBERON:0003408;1.44e-09;6!UBERON:0000167;1.44e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.46e-50,1;UBERON:0004909,4.32e-26,2;UBERON:0001044,1.44e-09,6;UBERON:0003293,1.44e-09,6;UBERON:0003294,1.44e-09,6;UBERON:0010047,1.44e-09,6;UBERON:0000167,1.44e-09,6 | |||
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| ||
|short_description=p11@PDZD2 | |||
}} | }} |
Latest revision as of 15:14, 17 September 2015
Short description: | p11@PDZD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PDZD2_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 131bp_to_ENST00000513852_5end |
EntrezGene: | PDZD2 |
HGNC: | 18486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.46e-50 | 1 |
seromucus secreting cell | 4.32e-26 | 2 |
acinar cell of salivary gland | 9.46e-18 | 3 |
acinar cell | 3.26e-11 | 5 |
protein secreting cell | 1.44e-09 | 6 |
glandular epithelial cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.46e-50 | 1 |
epithelium of gonad | 4.32e-26 | 2 |
saliva-secreting gland | 1.44e-09 | 6 |
gland of oral region | 1.44e-09 | 6 |
gland of foregut | 1.44e-09 | 6 |
oral gland | 1.44e-09 | 6 |
oral cavity | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.46e-50 | 1 |
bronchus cancer | 2.35e-08 | 7 |
bronchogenic carcinoma | 2.35e-08 | 7 |