FFCP PHASE1:Hg19::chr5:179233956..179233967,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:179233956..179233967,-
|short_description=p11@MGAT4B
|description=CAGE_peak_11_at_MGAT4B_5end
|association_with_transcript=-4bp_to_ENST00000518168,NM_01427...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11282 | |EntrezGene=11282 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7048 | |HGNC=7048 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQ53 | |UniProt=Q9UQ53 | ||
|association_with_transcript=-4bp_to_ENST00000518168,NM_014275,uc003mks.2_5end | |||
|cluster_id=chr5:179233956..179233967,- | |||
|description=CAGE_peak_11_at_MGAT4B_5end | |||
|id=chr5:179233956..179233967,- | |||
|ontology_enrichment_celltype=CL:0000222!6.84e-12!119;CL:0000220!1.60e-11!246;CL:0002321!3.61e-11!248;CL:0000359!8.08e-07!32;CL:0000192!9.06e-07!42;CL:0000514!9.06e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.61e-08;32!CL:1000449;8.26e-08;15!CL:1000497;2.22e-07;17!CL:0002518;2.22e-07;17!CL:0002681;4.08e-07;12!CL:0002584;4.08e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.43e-13,121;CL:0002321,4.19e-09,250;CL:0000359,8.94e-09,32;CL:0000213,7.43e-08,58;CL:0000215,7.43e-08,58;CL:1000449,1.82e-07,15;CL:1000497,5.15e-07,17;CL:0002518,5.15e-07,17;CL:0002078,8.44e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.62e-09!118;UBERON:0001637!2.91e-08!42;UBERON:0003509!2.91e-08!42;UBERON:0004572!2.91e-08!42;UBERON:0004872!7.07e-08!84;UBERON:0001981!2.43e-07!60;UBERON:0007500!2.43e-07!60;UBERON:0004537!2.43e-07!60;UBERON:0006965!2.43e-07!60;UBERON:0004535!5.61e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;7.86e-09;74!UBERON:0001637;2.65e-08;42!UBERON:0003509;2.65e-08;42!UBERON:0004572;2.65e-08;42!UBERON:0006555;8.26e-08;15!UBERON:0004819;8.26e-08;15!UBERON:0001285;8.26e-08;15!UBERON:0007684;8.26e-08;15!UBERON:0001737;2.17e-07;9!UBERON:0001557;2.17e-07;9!UBERON:0001225;4.08e-07;12!UBERON:0008987;4.08e-07;12!UBERON:0001851;5.69e-07;15!UBERON:0000353;5.69e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.59e-12,117;UBERON:0001637,3.10e-11,42;UBERON:0003509,3.10e-11,42;UBERON:0004572,3.10e-11,42;UBERON:0007500,1.35e-10,59;UBERON:0001981,1.35e-10,59;UBERON:0004537,1.35e-10,59;UBERON:0006965,1.35e-10,59;UBERON:0004872,4.14e-10,83;UBERON:0000055,4.06e-09,68;UBERON:0004535,4.37e-08,109;UBERON:0002049,5.21e-08,78;UBERON:0007798,5.21e-08,78;UBERON:0001009,6.52e-08,112;UBERON:0001737,7.85e-08,9;UBERON:0006555,1.45e-07,16;UBERON:0004819,1.45e-07,16;UBERON:0004211,1.82e-07,15;UBERON:0009773,1.82e-07,15;UBERON:0001231,1.82e-07,15;UBERON:0001285,1.82e-07,15;UBERON:0007684,1.82e-07,15;UBERON:0004208,1.82e-07,15;UBERON:0007503,6.72e-07,78;UBERON:0004573,7.38e-07,33;UBERON:0004571,7.38e-07,33 | |||
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| ||
|short_description=p11@MGAT4B | |||
}} | }} |
Latest revision as of 09:31, 17 September 2015
Short description: | p11@MGAT4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MGAT4B_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000518168, NM_014275, uc003mks.2_5end |
EntrezGene: | MGAT4B |
HGNC: | 7048 |
UniProt: | Q9UQ53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.43e-13 | 121 |
embryonic cell | 4.19e-09 | 250 |
vascular associated smooth muscle cell | 8.94e-09 | 32 |
lining cell | 7.43e-08 | 58 |
barrier cell | 7.43e-08 | 58 |
epithelial cell of nephron | 1.82e-07 | 15 |
kidney cell | 5.15e-07 | 17 |
kidney epithelial cell | 5.15e-07 | 17 |
meso-epithelial cell | 8.44e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.59e-12 | 117 |
artery | 3.10e-11 | 42 |
arterial blood vessel | 3.10e-11 | 42 |
arterial system | 3.10e-11 | 42 |
epithelial tube open at both ends | 1.35e-10 | 59 |
blood vessel | 1.35e-10 | 59 |
blood vasculature | 1.35e-10 | 59 |
vascular cord | 1.35e-10 | 59 |
splanchnic layer of lateral plate mesoderm | 4.14e-10 | 83 |
vessel | 4.06e-09 | 68 |
cardiovascular system | 4.37e-08 | 109 |
vasculature | 5.21e-08 | 78 |
vascular system | 5.21e-08 | 78 |
circulatory system | 6.52e-08 | 112 |
larynx | 7.85e-08 | 9 |
excretory tube | 1.45e-07 | 16 |
kidney epithelium | 1.45e-07 | 16 |
nephron epithelium | 1.82e-07 | 15 |
renal tubule | 1.82e-07 | 15 |
nephron tubule | 1.82e-07 | 15 |
nephron | 1.82e-07 | 15 |
uriniferous tubule | 1.82e-07 | 15 |
nephrogenic mesenchyme | 1.82e-07 | 15 |
epithelial vesicle | 6.72e-07 | 78 |
systemic artery | 7.38e-07 | 33 |
systemic arterial system | 7.38e-07 | 33 |