FFCP PHASE1:Hg19::chr5:158885630..158885652,+: Difference between revisions
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|id=chr5:158885630..158885652,+
|short_description=p@chr5:158885630..158885652,+
|description=CAGE_peak_at_chr5:158885630..158885652,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:158885630..158885652,+ | |||
|coexpression_cluster_id=C4471 | |||
|description=CAGE_peak_at_chr5:158885630..158885652,+ | |||
|id=chr5:158885630..158885652,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.81e-39!42;CL:0000860!3.33e-36!45;CL:0002009!1.56e-26!65;CL:0000766!6.37e-25!76;CL:0000738!1.66e-24!140;CL:0002194!2.12e-24!63;CL:0000576!2.12e-24!63;CL:0000040!2.12e-24!63;CL:0000559!2.12e-24!63;CL:0000557!5.25e-24!71;CL:0002087!1.18e-22!119;CL:0000839!1.22e-21!70;CL:0002031!1.45e-21!124;CL:0002032!4.83e-20!165;CL:0000837!4.83e-20!165;CL:0000037!5.05e-19!172;CL:0000566!5.05e-19!172;CL:0000988!1.06e-17!182;CL:0000763!1.34e-17!112;CL:0000049!1.34e-17!112;CL:0000767!6.74e-09!3;CL:0000134!4.55e-08!358;CL:0002320!8.29e-08!365;CL:0000219!6.86e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.65e-36;33!CL:0002057;5.65e-36;33!CL:0000473;7.55e-28;39!CL:0000234;7.55e-28;39!CL:0000576;2.13e-15;48!CL:0002087;5.61e-14;104!CL:0000766;1.06e-12;69!CL:0000945;6.90e-10;24!CL:0000763;2.26e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.69e-32,42;CL:0002057,1.69e-32,42;CL:0000473,2.50e-28,48;CL:0000234,2.50e-28,48;CL:0002087,1.13e-22,115;CL:0002194,1.74e-22,59;CL:0000576,1.74e-22,59;CL:0000040,1.74e-22,59;CL:0000559,1.74e-22,59;CL:0002009,9.92e-22,61;CL:0002031,1.10e-21,120;CL:0000839,4.87e-20,66;CL:0000557,9.92e-20,67;CL:0000738,5.24e-19,136;CL:0000766,2.59e-18,72;CL:0002032,7.09e-16,161;CL:0000837,7.09e-16,161;CL:0000037,3.65e-15,168;CL:0000988,2.49e-14,177;CL:0000763,6.24e-12,108;CL:0000049,6.24e-12,108;CL:0000945,6.66e-10,24;CL:0000826,6.66e-10,24 | |||
|ontology_enrichment_development_v019=CL:0002057;5.23e-21;42 | |||
|ontology_enrichment_disease=DOID:12603!3.40e-07!1;DOID:2355!4.34e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.26e-22!102;UBERON:0003061!8.26e-22!102;UBERON:0002371!6.42e-21!80;UBERON:0002405!6.48e-21!115;UBERON:0002193!1.71e-19!112;UBERON:0001474!3.24e-19!86;UBERON:0004765!7.65e-18!101;UBERON:0001434!7.65e-18!101;UBERON:0002204!2.76e-09!167;UBERON:0002106!1.23e-08!3;UBERON:0004854!1.23e-08!3;UBERON:0009034!1.23e-08!3;UBERON:0002095!1.23e-08!3;UBERON:0004782!1.23e-08!3;UBERON:0003281!1.23e-08!3;UBERON:0009664!1.23e-08!3;UBERON:0002296!1.23e-08!3;UBERON:0005602!1.23e-08!3;UBERON:0001179!1.23e-08!3;UBERON:0006293!1.23e-08!3;UBERON:0003081!4.38e-08!216;UBERON:0004177!5.96e-08!7;UBERON:0002384!1.88e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.60e-17,76;UBERON:0001474,5.46e-16,82;UBERON:0004765,1.70e-14,90;UBERON:0002405,5.32e-14,93;UBERON:0002390,3.05e-13,98;UBERON:0003061,3.05e-13,98;UBERON:0001434,5.85e-13,100;UBERON:0002193,6.24e-12,108;UBERON:0002204,2.37e-07,167 | |||
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|short_description=p@chr5:158885630..158885652,+ | |||
}} | }} |
Latest revision as of 12:25, 30 July 2015
Short description: | p@chr5:158885630..158885652, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:158885630..158885652, + |
Coexpression cluster: | C4471_CD14_B_b_xeroderma_CD4_Preadipocyte_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.69e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.69e-32 | 42 |
defensive cell | 2.50e-28 | 48 |
phagocyte | 2.50e-28 | 48 |
nongranular leukocyte | 1.13e-22 | 115 |
monopoietic cell | 1.74e-22 | 59 |
monocyte | 1.74e-22 | 59 |
monoblast | 1.74e-22 | 59 |
promonocyte | 1.74e-22 | 59 |
macrophage dendritic cell progenitor | 9.92e-22 | 61 |
hematopoietic lineage restricted progenitor cell | 1.10e-21 | 120 |
myeloid lineage restricted progenitor cell | 4.87e-20 | 66 |
granulocyte monocyte progenitor cell | 9.92e-20 | 67 |
leukocyte | 5.24e-19 | 136 |
myeloid leukocyte | 2.59e-18 | 72 |
hematopoietic oligopotent progenitor cell | 7.09e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.09e-16 | 161 |
hematopoietic stem cell | 3.65e-15 | 168 |
hematopoietic cell | 2.49e-14 | 177 |
myeloid cell | 6.24e-12 | 108 |
common myeloid progenitor | 6.24e-12 | 108 |
lymphocyte of B lineage | 6.66e-10 | 24 |
pro-B cell | 6.66e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.60e-17 | 76 |
bone element | 5.46e-16 | 82 |
skeletal element | 1.70e-14 | 90 |
immune system | 5.32e-14 | 93 |
hematopoietic system | 3.05e-13 | 98 |
blood island | 3.05e-13 | 98 |
skeletal system | 5.85e-13 | 100 |
hemolymphoid system | 6.24e-12 | 108 |
musculoskeletal system | 2.37e-07 | 167 |