FFCP PHASE1:Hg19::chr5:151051220..151051229,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:151051220..151051229,-
|short_description=p13@SPARC
|description=CAGE_peak_13_at_SPARC_5end
|association_with_transcript=160bp_to_ENST00000524277_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6678 | |EntrezGene=6678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11219 | |HGNC=11219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=160bp_to_ENST00000524277_5end | |||
|cluster_id=chr5:151051220..151051229,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_13_at_SPARC_5end | |||
|id=chr5:151051220..151051229,- | |||
|ontology_enrichment_celltype=CL:0000055!2.72e-26!180;CL:0000057!1.97e-16!75;CL:0000222!1.55e-10!119;CL:0000183!8.78e-09!59;CL:0000680!1.03e-08!57;CL:0000056!1.03e-08!57;CL:0000355!1.03e-08!57;CL:0000187!6.77e-08!54;CL:0002494!5.01e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000136;7.69e-09;13!CL:0002334;1.22e-07;12!CL:0000135;1.35e-07;3!CL:0000388;1.35e-07;3!CL:0002579;1.42e-07;3!CL:0002615;4.12e-07;3!CL:0002580;8.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.79e-13,76;CL:0000136,2.14e-09,15;CL:0002334,1.11e-07,12;CL:0002579,1.43e-07,3;CL:0000135,1.59e-07,3;CL:0000388,1.59e-07,3;CL:0002580,4.32e-07,3;CL:0002615,4.68e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!1.80e-09!63;UBERON:0001015!1.80e-09!63;UBERON:0000383!1.80e-09!63;UBERON:0001134!2.36e-09!61;UBERON:0002036!2.36e-09!61;UBERON:0003082!2.36e-09!61;UBERON:0000914!1.25e-08!83;UBERON:0002329!1.25e-08!83;UBERON:0003077!1.25e-08!83;UBERON:0003059!1.25e-08!83;UBERON:0007282!1.25e-08!83;UBERON:0009618!1.25e-08!83;UBERON:0007285!1.25e-08!83;UBERON:0004290!9.38e-08!70;UBERON:0000475!1.95e-07!365;UBERON:0004872!2.79e-07!84;UBERON:0002049!3.19e-07!79;UBERON:0007798!3.19e-07!79;UBERON:0005256!9.10e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.04e-13;6!UBERON:0002358;5.04e-13;6!UBERON:0003684;5.04e-13;6!UBERON:0001178;5.04e-13;6!UBERON:0004457;2.48e-08;9!UBERON:0000042;2.48e-08;9!UBERON:0007846;1.35e-07;3!UBERON:0000043;1.35e-07;3!UBERON:0007845;1.35e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.78e-13,6;UBERON:0002358,5.78e-13,6;UBERON:0003684,5.78e-13,6;UBERON:0001178,5.78e-13,6;UBERON:0007846,1.59e-07,3;UBERON:0000043,1.59e-07,3;UBERON:0007845,1.59e-07,3 | |||
|phase1_expression=2.18014055124668,4.28201047781966,4.65149533516705,2.00146596706261,2.23480547213644,3.48935409640147,0,0,1.04474251279935,0,0,0.655324116390517,0.527533956456907,0,0.331397375727916,0.672325146451775,0,0,0,0.369363174230364,0.408001382488506,0.626909442956176,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.767175371061182,0,2.00535164254356,1.01392563272577,0.795285947051099,4.37971383272372,0.0945348171640679,0.665188192387692,0.263504357079378,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.825354125820202,0.626984899610432,0,0.71153252537342,0.66944122552934,0.805658634218294,0,0,0,1.62028389576352,0.267899184852239,0.44905874525234,0.112611480483322,0,0,0.366403487860815,0,0,0,5.4666914686485,0.506522046658319,0.529636723252875,2.0078563452417,0.709336764396714,1.68203280042692,1.06748995729705,1.72667283892012,0.622422070799533,0.808264032418128,0.653847612453835,1.66493170409425,0,0.234321431833797,0,0,0.448346041655403,0.23486899728753,0,0.421352420106746,0.204154171254893,0.491337269247072,0.516628905878827,2.37600571456411,1.48360157567134,0.910161361938026,0,0.168336113954066,0,0,0.438977620880838,2.14541457059314,1.05166641234618,0.907457465280168,1.07633781413317,1.92201649936711,0.847727604638247,1.50045548042201,0.206105058476878,0.257640540045629,1.48893485065272,1.0126579934476,1.16924406193438,0.757301322732344,0.644349290496095,1.13152239773168,1.06502877754984,0.403008392910561,0.508681776931463,0,0,0,0,0.132529768321485,0.232387885739037,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,1.4763109092493,0,1.6462960453256,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0.325808305310325,0,0,0,1.17408694235822,0.577465791044295,0.462985512576611,0.380508304469197,0,0,0,0.234004265139238,0.297262324577456,0,0.503946384596579,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0.308482478109971,0.901029173531752,0,0.224262168690721,0.87192013766656,0.2933531432838,2.19761916788222,3.57656445851882,0,0.797814349754612,2.08014873822732,0.514414748524284,0,0.266422179016099,0.857867961948885,2.17048642156577,0,1.62868092146868,0.710783897485092,0,0.602878754119172,1.74306691720059,1.89948683245908,0,0,0,0.958499421966331,1.14861935834114,0,1.01346914667305,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,3.11956292296211,3.39015078714607,2.20783381047509,1.05427273493442,2.70851489754947,4.5481500811197,1.03473071292505,1.32845119707087,0.921845842708516,0.521301686808497,1.17480694477644,1.02943027143257,0,0,0,0,0,2.11673205330776,2.48107807818777,1.84154367945675,5.05188169979532,6.02254001501795,5.11707249066703,3.53878626515936,0,0,0.710246901252508,0.246381468041427,1.03850885836724,0.697262270759755,0,0.200506470303285,0,0.229628896329213,0,0.917870904715969,0,0,0,1.46139224653261,0,1.13733384070897,0.510281115829547,0.431831832204279,4.62681758070868,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.460511024178389,0.275673144969061,0.644521469209642,0.435050081742686,0.255679882248303,0.712256285173899,0,0,0,0,0,2.51849877464512,0,1.54016790088044,0,0.869932992075073,0.9266210955196,1.71749864090389,0.744316738719335,0.949138274156178,0.953150969619124,0,0.855877976067841,0,2.35484592059769,1.2591072030832,1.37268514868027,0.824686816419805,1.41527737101321,1.58510321173008,2.10629228119491,0.975267478179181,0.487426979262569,0,0.272999822815972,0.565621727814851,0,0.551365343546124,0,1.31535265576129,1.15755106853338,0,0.405820753925408,0.92947049429925,0.845086807596724,0,0.687743287091848,0.35667105148125,0.354761064070598,0.422215270595328,0.987884678879706,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0,0,0.95497793895076,0.593929361665277,0.307160702099232,0,0,0,0,0,0.398495976502139,0,0,0.613612095012929,0,2.48831670129446,0,0,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0.221158519862449,0,0,0,0,0.538651809526579,0,0.23056390438806,0,0,0.31900115973192,0.732780747214898,1.06606955203727,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.290967049465258,0,1.58186518546373,0.274083849293502,0.19871461170299,0.0633107959558787,0,0,0,0.19980960958213,0,0,0,0,0,0,1.49494626680975,1.15063130943567,0.203996435272644,0,0.600420288709789,0.136905378891993,0,1.71906176567983,0,1.11712960508902,0,0,0.399358000997982,0,0,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| ||
|short_description=p13@SPARC | |||
}} | }} |
Latest revision as of 10:20, 16 September 2015
Short description: | p13@SPARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SPARC_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 160bp_to_ENST00000524277_5end |
EntrezGene: | SPARC |
HGNC: | 11219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.79e-13 | 76 |
fat cell | 2.14e-09 | 15 |
preadipocyte | 1.11e-07 | 12 |
omentum preadipocyte | 1.43e-07 | 3 |
fibrocyte | 1.59e-07 | 3 |
tendon cell | 1.59e-07 | 3 |
preadipocyte of the breast | 4.32e-07 | 3 |
adipocyte of omentum tissue | 4.68e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.78e-13 | 6 |
peritoneum | 5.78e-13 | 6 |
abdominal cavity | 5.78e-13 | 6 |
visceral peritoneum | 5.78e-13 | 6 |
dense regular connective tissue | 1.59e-07 | 3 |
tendon | 1.59e-07 | 3 |
regular connective tissue | 1.59e-07 | 3 |