FFCP PHASE1:Hg19::chr5:150157860..150157883,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:150157860..150157883,+
|short_description=p4@C5orf62
|description=CAGE_peak_4_at_C5orf62_5end
|association_with_transcript=0bp_to_uc003lsw.2_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85027 | |EntrezGene=85027 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30248 | |HGNC=30248 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003lsw.2_5end | |||
|cluster_id=chr5:150157860..150157883,+ | |||
|coexpression_cluster_id=C2814 | |||
|description=CAGE_peak_4_at_C5orf62_5end | |||
|id=chr5:150157860..150157883,+ | |||
|ontology_enrichment_celltype=CL:0000359!1.17e-11!32;CL:0000192!1.68e-10!42;CL:0000514!1.68e-10!42;CL:0000187!7.86e-10!54;CL:0000680!9.76e-10!57;CL:0000056!9.76e-10!57;CL:0000355!9.76e-10!57;CL:0002595!1.57e-08!5;CL:0000183!2.22e-08!59;CL:0000393!4.02e-08!60;CL:0000211!4.02e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.04e-38;32!CL:0002595;5.57e-28;5!CL:0000192;3.03e-23;43!CL:0002582;1.98e-16;3!CL:0002539;1.40e-13;10!CL:0002593;2.32e-12;2!CL:0000187;1.39e-11;55!CL:0000393;8.83e-10;61!CL:0000211;8.83e-10;61!CL:0002334;2.36e-07;12!CL:0002591;3.31e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.54e-41,32;CL:0000192,1.51e-29,43;CL:0000514,1.51e-29,43;CL:0002595,8.03e-28,5;CL:0000187,2.46e-22,55;CL:0000680,5.33e-21,58;CL:0000056,5.33e-21,58;CL:0000355,5.33e-21,58;CL:0000393,8.54e-20,61;CL:0000211,8.54e-20,61;CL:0002582,3.05e-16,3;CL:0002539,1.38e-13,10;CL:0002593,3.00e-12,2;CL:0000222,1.62e-09,121;CL:0002334,2.63e-07,12;CL:0002591,3.32e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;3.03e-23;43!CL:0000355;4.32e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.69e-08;3!DOID:127;2.69e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.28e-08,3;DOID:127,2.28e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.27e-13!42;UBERON:0003509!3.27e-13!42;UBERON:0004572!3.27e-13!42;UBERON:0000025!7.52e-12!194;UBERON:0001049!1.18e-10!57;UBERON:0005068!1.18e-10!57;UBERON:0006241!1.18e-10!57;UBERON:0007135!1.18e-10!57;UBERON:0004573!1.50e-10!33;UBERON:0004571!1.50e-10!33;UBERON:0004872!2.41e-10!84;UBERON:0000955!4.02e-10!69;UBERON:0006238!4.02e-10!69;UBERON:0003075!6.82e-10!86;UBERON:0007284!6.82e-10!86;UBERON:0001981!8.74e-10!60;UBERON:0007500!8.74e-10!60;UBERON:0004537!8.74e-10!60;UBERON:0006965!8.74e-10!60;UBERON:0000483!1.70e-09!309;UBERON:0004111!2.09e-09!241;UBERON:0001017!2.34e-09!82;UBERON:0000119!3.36e-09!312;UBERON:0005743!3.79e-09!86;UBERON:0002346!5.04e-09!90;UBERON:0002616!5.49e-09!59;UBERON:0002020!8.21e-09!34;UBERON:0003528!8.21e-09!34;UBERON:0000073!1.30e-08!94;UBERON:0001016!1.30e-08!94;UBERON:0001134!1.32e-08!61;UBERON:0002036!1.32e-08!61;UBERON:0003082!1.32e-08!61;UBERON:0004290!1.41e-08!70;UBERON:0003834!1.57e-08!5;UBERON:0001533!1.57e-08!5;UBERON:0007023!2.60e-08!115;UBERON:0000055!3.29e-08!69;UBERON:0002049!3.36e-08!79;UBERON:0007798!3.36e-08!79;UBERON:0002385!4.24e-08!63;UBERON:0001015!4.24e-08!63;UBERON:0000383!4.24e-08!63;UBERON:0000477!5.91e-08!286;UBERON:0001893!1.32e-07!34;UBERON:0001009!2.38e-07!113;UBERON:0001869!2.43e-07!32;UBERON:0002780!2.46e-07!41;UBERON:0001890!2.46e-07!41;UBERON:0006240!2.46e-07!41;UBERON:0004535!3.24e-07!110;UBERON:0000914!3.40e-07!83;UBERON:0002329!3.40e-07!83;UBERON:0003077!3.40e-07!83;UBERON:0003059!3.40e-07!83;UBERON:0007282!3.40e-07!83;UBERON:0009618!3.40e-07!83;UBERON:0007285!3.40e-07!83;UBERON:0002791!3.97e-07!33;UBERON:0003080!4.81e-07!42;UBERON:0003513!6.12e-07!8;UBERON:0000486!7.78e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;5.57e-28;5!UBERON:0001533;5.57e-28;5!UBERON:0004573;4.88e-25;33!UBERON:0004571;4.88e-25;33!UBERON:0001637;3.78e-20;42!UBERON:0003509;3.78e-20;42!UBERON:0004572;3.78e-20;42!UBERON:0003513;6.11e-20;7!UBERON:0004237;1.40e-13;10!UBERON:0004695;1.40e-13;10!UBERON:0002111;1.40e-13;10!UBERON:0004178;1.40e-13;10!UBERON:0002456;2.32e-12;2!UBERON:0007500;4.01e-12;56!UBERON:0001981;4.01e-12;56!UBERON:0004537;4.01e-12;56!UBERON:0000055;3.68e-10;65!UBERON:0001135;5.67e-09;15!UBERON:0000947;8.09e-09;21!UBERON:0010191;8.09e-09;21!UBERON:0003914;1.05e-08;74!UBERON:0002049;3.10e-08;75!UBERON:0007798;3.10e-08;75!UBERON:0002134;6.23e-07;1!UBERON:0005208;6.23e-07;1!UBERON:0004145;6.23e-07;1!UBERON:0005946;6.23e-07;1!UBERON:0005965;6.23e-07;1!UBERON:0002078;6.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.00e-34,42;UBERON:0003509,3.00e-34,42;UBERON:0004572,3.00e-34,42;UBERON:0004573,9.14e-30,33;UBERON:0004571,9.14e-30,33;UBERON:0003834,8.03e-28,5;UBERON:0001533,8.03e-28,5;UBERON:0007500,2.20e-26,59;UBERON:0001981,2.20e-26,59;UBERON:0004537,2.20e-26,59;UBERON:0006965,2.20e-26,59;UBERON:0004872,1.01e-24,83;UBERON:0000055,2.30e-22,68;UBERON:0003513,7.91e-20,7;UBERON:0001134,2.03e-19,62;UBERON:0002036,2.03e-19,62;UBERON:0003082,2.03e-19,62;UBERON:0002049,5.46e-19,78;UBERON:0007798,5.46e-19,78;UBERON:0002385,1.05e-18,64;UBERON:0001015,1.05e-18,64;UBERON:0000383,1.05e-18,64;UBERON:0002329,1.62e-16,71;UBERON:0003059,1.62e-16,71;UBERON:0007282,1.62e-16,71;UBERON:0004290,1.62e-16,71;UBERON:0009618,1.62e-16,71;UBERON:0003914,3.06e-16,117;UBERON:0003077,3.07e-16,72;UBERON:0007285,3.07e-16,72;UBERON:0007524,5.72e-16,73;UBERON:0004535,6.85e-16,109;UBERON:0001009,2.39e-15,112;UBERON:0007503,1.01e-14,78;UBERON:0000486,1.25e-13,83;UBERON:0004237,1.38e-13,10;UBERON:0004695,1.38e-13,10;UBERON:0002111,1.38e-13,10;UBERON:0004178,1.38e-13,10;UBERON:0002456,3.00e-12,2;UBERON:0005256,2.08e-09,122;UBERON:0000025,4.89e-09,192;UBERON:0001135,5.63e-09,15;UBERON:0000947,9.03e-09,21;UBERON:0010191,9.03e-09,21;UBERON:0004145,1.17e-08,3;UBERON:0003081,2.70e-08,203;UBERON:0000490,3.38e-08,148;UBERON:0003104,2.59e-07,160;UBERON:0009142,2.59e-07,160;UBERON:0004111,3.98e-07,240;UBERON:0000926,4.20e-07,315;UBERON:0004120,4.20e-07,315;UBERON:0006603,4.20e-07,315;UBERON:0002134,4.97e-07,1;UBERON:0005208,4.97e-07,1;UBERON:0005946,4.97e-07,1;UBERON:0005965,4.97e-07,1;UBERON:0002078,4.97e-07,1 | |||
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| ||
|short_description=p4@C5orf62 | |||
}} | }} |
Latest revision as of 06:15, 16 September 2015
Short description: | p4@C5orf62 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C5orf62_5end |
Coexpression cluster: | C2814_Smooth_mesenchymal_alveolar_Preadipocyte_pancreas_leiomyoma_Mast |
Association with transcript: | 0bp_to_uc003lsw.2_5end |
EntrezGene: | C5orf62 |
HGNC: | 30248 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.54e-41 | 32 |
smooth muscle cell | 1.51e-29 | 43 |
smooth muscle myoblast | 1.51e-29 | 43 |
smooth muscle cell of the subclavian artery | 8.03e-28 | 5 |
muscle cell | 2.46e-22 | 55 |
muscle precursor cell | 5.33e-21 | 58 |
myoblast | 5.33e-21 | 58 |
multi-potent skeletal muscle stem cell | 5.33e-21 | 58 |
electrically responsive cell | 8.54e-20 | 61 |
electrically active cell | 8.54e-20 | 61 |
visceral preadipocyte | 3.05e-16 | 3 |
aortic smooth muscle cell | 1.38e-13 | 10 |
smooth muscle cell of the internal thoracic artery | 3.00e-12 | 2 |
mesodermal cell | 1.62e-09 | 121 |
preadipocyte | 2.63e-07 | 12 |
smooth muscle cell of the pulmonary artery | 3.32e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.28e-08 | 3 |
leiomyoma | 2.28e-08 | 3 |