FFCP PHASE1:Hg19::chr5:150028254..150028266,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:150028254..150028266,+
|short_description=p16@SYNPO
|description=CAGE_peak_16_at_SYNPO_5end
|association_with_transcript=416bp_to_Y11072_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11346 | |EntrezGene=11346 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=30672 | |HGNC=30672 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N3V7 | |UniProt=Q8N3V7 | ||
|association_with_transcript=416bp_to_Y11072_5end | |||
|cluster_id=chr5:150028254..150028266,+ | |||
|coexpression_cluster_id=C713 | |||
|description=CAGE_peak_16_at_SYNPO_5end | |||
|id=chr5:150028254..150028266,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002548;2.13e-11;6!CL:0002595;5.53e-09;5!CL:0000317;9.78e-07;2!CL:1000448;9.78e-07;2!CL:0002308;9.78e-07;2!CL:0002140;9.78e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,3.53e-11,6;CL:0002595,1.04e-08,5;CL:0000317,8.35e-07,2;CL:1000448,8.35e-07,2;CL:0002308,8.35e-07,2;CL:0002140,8.35e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;5.28e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.18e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.23e-22!115;UBERON:0000477!3.10e-19!286;UBERON:0004111!3.66e-19!241;UBERON:0000025!2.50e-14!194;UBERON:0000483!2.63e-14!309;UBERON:0000119!2.78e-14!312;UBERON:0000055!7.32e-12!69;UBERON:0004872!1.87e-11!84;UBERON:0002049!2.00e-11!79;UBERON:0007798!2.00e-11!79;UBERON:0001869!3.14e-11!32;UBERON:0001981!6.28e-11!60;UBERON:0007500!6.28e-11!60;UBERON:0004537!6.28e-11!60;UBERON:0006965!6.28e-11!60;UBERON:0002619!8.76e-11!22;UBERON:0001893!1.16e-10!34;UBERON:0002020!1.55e-10!34;UBERON:0003528!1.55e-10!34;UBERON:0000481!1.73e-10!347;UBERON:0002780!2.20e-10!41;UBERON:0001890!2.20e-10!41;UBERON:0006240!2.20e-10!41;UBERON:0002791!2.61e-10!33;UBERON:0001009!6.99e-10!113;UBERON:0003080!7.30e-10!42;UBERON:0003075!1.10e-09!86;UBERON:0007284!1.10e-09!86;UBERON:0001950!2.14e-09!20;UBERON:0000956!3.01e-09!25;UBERON:0000203!3.01e-09!25;UBERON:0001049!6.92e-09!57;UBERON:0005068!6.92e-09!57;UBERON:0006241!6.92e-09!57;UBERON:0007135!6.92e-09!57;UBERON:0002346!7.32e-09!90;UBERON:0001637!9.61e-09!42;UBERON:0003509!9.61e-09!42;UBERON:0004572!9.61e-09!42;UBERON:0004535!1.12e-08!110;UBERON:0000153!1.67e-08!129;UBERON:0007811!1.67e-08!129;UBERON:0002616!1.71e-08!59;UBERON:0000033!4.07e-08!123;UBERON:0003914!5.91e-08!118;UBERON:0003056!9.16e-08!61;UBERON:0000475!1.47e-07!365;UBERON:0000955!3.51e-07!69;UBERON:0006238!3.51e-07!69;UBERON:0000480!6.34e-07!626;UBERON:0000467!8.34e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.44e-13;25!UBERON:0000948;3.14e-10;22!UBERON:0003834;5.53e-09;5!UBERON:0001533;5.53e-09;5!UBERON:0002419;9.78e-07;2!UBERON:0007771;9.78e-07;2!UBERON:0003297;9.78e-07;2!UBERON:0001821;9.78e-07;2!UBERON:0003487;9.78e-07;2!UBERON:0001820;9.78e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,8.90e-14,27;UBERON:0004111,5.47e-12,240;UBERON:0001009,6.54e-12,112;UBERON:0007023,7.73e-12,114;UBERON:0004872,1.05e-11,83;UBERON:0000025,3.20e-11,192;UBERON:0003914,4.27e-11,117;UBERON:0000948,6.24e-11,24;UBERON:0005498,6.24e-11,24;UBERON:0004140,6.24e-11,24;UBERON:0009881,6.24e-11,24;UBERON:0004141,6.24e-11,24;UBERON:0003084,6.24e-11,24;UBERON:0007005,6.24e-11,24;UBERON:0004139,6.24e-11,24;UBERON:0004291,6.24e-11,24;UBERON:0004535,3.35e-10,109;UBERON:0000055,4.83e-10,68;UBERON:0003103,1.40e-09,68;UBERON:0003834,1.04e-08,5;UBERON:0001533,1.04e-08,5;UBERON:0007500,1.78e-08,59;UBERON:0001981,1.78e-08,59;UBERON:0004537,1.78e-08,59;UBERON:0006965,1.78e-08,59;UBERON:0002049,3.82e-08,78;UBERON:0007798,3.82e-08,78;UBERON:0001637,1.52e-07,42;UBERON:0003509,1.52e-07,42;UBERON:0004572,1.52e-07,42;UBERON:0010314,2.87e-07,132;UBERON:0000483,4.09e-07,306;UBERON:0000119,6.05e-07,309;UBERON:0002419,8.35e-07,2;UBERON:0007771,8.35e-07,2;UBERON:0003297,8.35e-07,2;UBERON:0001821,8.35e-07,2;UBERON:0003487,8.35e-07,2;UBERON:0001820,8.35e-07,2;UBERON:0005089,8.35e-07,2;UBERON:0005088,8.35e-07,2 | |||
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| ||
|short_description=p16@SYNPO | |||
}} | }} |
Latest revision as of 05:45, 16 September 2015
Short description: | p16@SYNPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SYNPO_5end |
Coexpression cluster: | C713_skeletal_heart_Renal_aorta_Fibroblast_Smooth_mature |
Association with transcript: | 416bp_to_Y11072_5end |
EntrezGene: | SYNPO |
HGNC: | 30672 |
UniProt: | Q8N3V7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 3.53e-11 | 6 |
smooth muscle cell of the subclavian artery | 1.04e-08 | 5 |
sebum secreting cell | 8.35e-07 | 2 |
epithelial cell of sweat gland | 8.35e-07 | 2 |
epithelial cell of skin gland | 8.35e-07 | 2 |
acinar cell of sebaceous gland | 8.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.18e-07 | 2 |