FFCP PHASE1:Hg19::chr5:142784101..142784130,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:142784101..142784130,-
|short_description=p4@NR3C1
|description=CAGE_peak_4_at_NR3C1_5end
|association_with_transcript=0bp_to_ENST00000503201_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2908 | |EntrezGene=2908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |HGNC=7978 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000503201_5end | |||
|cluster_id=chr5:142784101..142784130,- | |||
|description=CAGE_peak_4_at_NR3C1_5end | |||
|id=chr5:142784101..142784130,- | |||
|ontology_enrichment_celltype=CL:0000738!6.99e-13!140;CL:0000838!7.36e-11!52;CL:0002087!2.80e-10!119;CL:0000542!3.95e-10!53;CL:0000051!3.95e-10!53;CL:0002031!5.35e-10!124;CL:0000037!1.84e-08!172;CL:0000566!1.84e-08!172;CL:0002032!3.04e-07!165;CL:0000837!3.04e-07!165;CL:0000988!5.87e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.22e-08;18!CL:0000789;2.22e-08;18!CL:0002419;2.22e-08;18!CL:0000542;7.27e-08;53!CL:0000236;2.16e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.36e-16,136;CL:0000838,2.20e-13,52;CL:0000542,8.02e-13,53;CL:0000051,8.02e-13,53;CL:0002087,1.40e-12,115;CL:0002031,1.05e-11,120;CL:0000037,3.55e-10,168;CL:0000988,1.40e-08,177;CL:0002032,1.77e-08,161;CL:0000837,1.77e-08,161;CL:0000791,3.70e-08,18;CL:0000789,3.70e-08,18;CL:0002420,3.70e-08,18;CL:0002419,3.70e-08,18;CL:0000790,3.70e-08,18;CL:0000236,1.35e-07,14;CL:0000945,3.44e-07,24;CL:0000826,3.44e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;2.22e-08;18!CL:0000051;7.27e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.32e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.93e-07;15!UBERON:0000179;1.93e-07;15!UBERON:0000463;1.93e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-07,114;UBERON:0000178,2.55e-07,15;UBERON:0000179,2.55e-07,15;UBERON:0000463,2.55e-07,15 | |||
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| ||
|short_description=p4@NR3C1 | |||
}} | }} |
Latest revision as of 07:42, 25 September 2015
Short description: | p4@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NR3C1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503201_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.36e-16 | 136 |
lymphoid lineage restricted progenitor cell | 2.20e-13 | 52 |
lymphocyte | 8.02e-13 | 53 |
common lymphoid progenitor | 8.02e-13 | 53 |
nongranular leukocyte | 1.40e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.05e-11 | 120 |
hematopoietic stem cell | 3.55e-10 | 168 |
hematopoietic cell | 1.40e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.77e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-08 | 161 |
mature alpha-beta T cell | 3.70e-08 | 18 |
alpha-beta T cell | 3.70e-08 | 18 |
immature T cell | 3.70e-08 | 18 |
mature T cell | 3.70e-08 | 18 |
immature alpha-beta T cell | 3.70e-08 | 18 |
B cell | 1.35e-07 | 14 |
lymphocyte of B lineage | 3.44e-07 | 24 |
pro-B cell | 3.44e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-07 | 114 |
blood | 2.55e-07 | 15 |
haemolymphatic fluid | 2.55e-07 | 15 |
organism substance | 2.55e-07 | 15 |