FFCP PHASE1:Hg19::chr5:140012752..140012768,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:140012752..140012768,-
|short_description=p1@CD14
|description=CAGE_peak_1_at_CD14_5end
|association_with_transcript=241bp_to_uc003lgi.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=929 | |EntrezGene=929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1628 | |HGNC=1628 | ||
|TSSclassifier=strong | |||
|UniProt=P08571 | |UniProt=P08571 | ||
|association_with_transcript=241bp_to_uc003lgi.1_5end | |||
|cluster_id=chr5:140012752..140012768,- | |||
|coexpression_cluster_id=C803 | |||
|description=CAGE_peak_1_at_CD14_5end | |||
|id=chr5:140012752..140012768,- | |||
|ontology_enrichment_celltype=CL:0000766!7.39e-29!76;CL:0002057!6.29e-28!42;CL:0002194!3.51e-24!63;CL:0000576!3.51e-24!63;CL:0000040!3.51e-24!63;CL:0000559!3.51e-24!63;CL:0000860!3.90e-24!45;CL:0002009!3.59e-23!65;CL:0000839!4.07e-23!70;CL:0000557!2.05e-22!71;CL:0000738!4.12e-16!140;CL:0002087!2.80e-13!119;CL:0002031!3.57e-12!124;CL:0000763!9.40e-11!112;CL:0000049!9.40e-11!112;CL:0000037!1.44e-07!172;CL:0000566!1.44e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.09e-24;39!CL:0000234;1.09e-24;39!CL:0000860;1.32e-24;33!CL:0002057;1.32e-24;33!CL:0000576;3.47e-20;48!CL:0000766;1.05e-16;69!CL:0000094;8.02e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.34e-37,48;CL:0000234,8.34e-37,48;CL:0000766,3.79e-36,72;CL:0000860,6.94e-32,42;CL:0002057,6.94e-32,42;CL:0002194,1.51e-31,59;CL:0000576,1.51e-31,59;CL:0000040,1.51e-31,59;CL:0000559,1.51e-31,59;CL:0002009,2.27e-30,61;CL:0000839,8.01e-29,66;CL:0000557,1.11e-28,67;CL:0000738,2.82e-19,136;CL:0002087,1.80e-16,115;CL:0000763,4.50e-15,108;CL:0000049,4.50e-15,108;CL:0002031,1.66e-14,120;CL:0000037,2.69e-10,168;CL:0002032,5.40e-09,161;CL:0000837,5.40e-09,161;CL:0000988,2.13e-08,177;CL:0000094,8.09e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.77e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.00e-40!115;UBERON:0002390!1.78e-23!102;UBERON:0003061!1.78e-23!102;UBERON:0002193!1.13e-21!112;UBERON:0002405!4.28e-20!115;UBERON:0002371!2.98e-19!80;UBERON:0001474!1.27e-15!86;UBERON:0000062!1.60e-12!511;UBERON:0001049!5.16e-12!57;UBERON:0005068!5.16e-12!57;UBERON:0006241!5.16e-12!57;UBERON:0007135!5.16e-12!57;UBERON:0004765!5.54e-12!101;UBERON:0001434!5.54e-12!101;UBERON:0003081!2.36e-11!216;UBERON:0002616!2.93e-10!59;UBERON:0003080!1.38e-09!42;UBERON:0000467!1.42e-09!625;UBERON:0000480!2.17e-09!626;UBERON:0002780!3.39e-09!41;UBERON:0001890!3.39e-09!41;UBERON:0006240!3.39e-09!41;UBERON:0000479!5.43e-09!787;UBERON:0002204!3.37e-08!167;UBERON:0002050!4.39e-08!605;UBERON:0005423!4.39e-08!605;UBERON:0003075!6.13e-08!86;UBERON:0007284!6.13e-08!86;UBERON:0000923!7.34e-08!604;UBERON:0005291!7.34e-08!604;UBERON:0006598!7.34e-08!604;UBERON:0002532!7.34e-08!604;UBERON:0002020!8.83e-08!34;UBERON:0003528!8.83e-08!34;UBERON:0000922!1.15e-07!612;UBERON:0000468!1.72e-07!659;UBERON:0001893!1.81e-07!34;UBERON:0000955!2.03e-07!69;UBERON:0006238!2.03e-07!69;UBERON:0002791!2.83e-07!33;UBERON:0001869!8.06e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.80e-11;114!UBERON:0002780;4.18e-08;41!UBERON:0001890;4.18e-08;41!UBERON:0003528;6.69e-08;34!UBERON:0002020;6.69e-08;34!UBERON:0001893;1.29e-07;34!UBERON:0002791;1.53e-07;32!UBERON:0000073;1.65e-07;53!UBERON:0002616;1.65e-07;53!UBERON:0001869;2.46e-07;32!UBERON:0002619;3.37e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.24e-45,114;UBERON:0002390,1.28e-28,98;UBERON:0003061,1.28e-28,98;UBERON:0002193,7.00e-26,108;UBERON:0002371,1.73e-23,76;UBERON:0002405,1.18e-20,93;UBERON:0001474,8.45e-20,82;UBERON:0003081,4.83e-17,203;UBERON:0004765,8.87e-16,90;UBERON:0000923,2.63e-14,560;UBERON:0010316,2.63e-14,560;UBERON:0005291,2.63e-14,560;UBERON:0006598,2.63e-14,560;UBERON:0010317,2.63e-14,560;UBERON:0002532,2.63e-14,560;UBERON:0002050,4.05e-14,564;UBERON:0001434,6.75e-14,100;UBERON:0001049,2.02e-13,56;UBERON:0005068,2.02e-13,56;UBERON:0006241,2.02e-13,56;UBERON:0007135,2.02e-13,56;UBERON:0005423,2.52e-12,581;UBERON:0000073,3.64e-12,53;UBERON:0002616,3.64e-12,53;UBERON:0000922,1.78e-11,592;UBERON:0000479,3.93e-11,773;UBERON:0002780,9.58e-11,41;UBERON:0001890,9.58e-11,41;UBERON:0003080,9.58e-11,41;UBERON:0006240,9.58e-11,41;UBERON:0000926,7.82e-10,315;UBERON:0004120,7.82e-10,315;UBERON:0006603,7.82e-10,315;UBERON:0003528,4.08e-09,34;UBERON:0002020,4.08e-09,34;UBERON:0001893,9.49e-09,34;UBERON:0003075,9.67e-09,82;UBERON:0007284,9.67e-09,82;UBERON:0000955,1.50e-08,68;UBERON:0006238,1.50e-08,68;UBERON:0002204,1.67e-08,167;UBERON:0001017,2.85e-08,81;UBERON:0002791,3.14e-08,32;UBERON:0010314,5.13e-08,132;UBERON:0001869,5.40e-08,32;UBERON:0002346,1.39e-07,86;UBERON:0002619,4.28e-07,22 | |||
|phase1_expression=0.908391896352783,0.642301571672949,2.39622486963151,1.0007329835313,0.446961094427288,1.74467704820074,5.06599756336621,3.15859936713415,2.87304191019822,0,0,0,0,0,0,4.03395087871065,0,0.730310090387373,1.46379839637152,0.369363174230364,0,0,0,0,0,0,0,0,195.895409870754,98.6441553109837,129.735911338872,0,0,0.369754010166788,0,0,1.46800219667424,257.053869558791,225.81304785138,264.970273144055,653.385353832099,409.725487514009,666.090417902006,395.628607719196,203.297257704579,220.023743497349,553.878394946246,257.802265789685,412.838592403173,1188.74496507513,631.436141594233,1142.44565259176,597.099519035823,282.722291409716,391.382546257648,489.9948098294,228.695353748475,568.999862614954,788.472106747445,467.593592449868,675.779341969587,706.871336300133,527.581374409216,520.846645150952,380.754521080702,195.747902518443,399.851883855159,764.54968837627,446.910861086113,765.590677585536,351.131711527354,336.237481656647,554.75856518387,108.162706591714,92.4828704847939,231.04382735023,663.862210075786,630.742949934326,372.401184377135,18.2408155994399,6.16641699317179,22.2850267592853,0,4.91524750135918,0.889509253863555,20.9097809057589,0.800791974072025,12.6445536789986,1.98313461835459,3.81621501814146,1.1384259382189,9.39579502993502,2.6759125968766,6.60856642895129,14.5732226375199,1.05353633910031,0.590129310341499,0.393010762749165,1.64481199199607,0,0.32592226663359,0,0,0,1.17842362989935,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,7.64556994377832,1.95325036156926,0,24.6943195287547,8.70308955850045,27.4847598415161,34.0959242943384,10.6746639599736,0,0.267440195783507,0.434473211648397,0,4.69490601792545,6.26526553033299,0.722878304769133,0,0.869079113764942,0,0.973269740605272,0,0,1.05401742831751,29.7322501379808,1.45718115317017,1.85392221392215,0,0.174129737299267,2.26028532882071,27.187931170809,19.4478269665243,7.4291500265913,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,208.21305954898,356.757843016459,0.436094052142534,2.98183171017191,13.2962037247809,2.78059279707759,10.3261183469573,13.1227301413392,17.9416832045538,26.6872489324262,30.0934409068935,0.311211035399766,4.58016285036939,2.28846664358842,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0,0,0,2.44985005505872,0,1.34323515528495,15.4440371446667,3.4617370098998,0,0.718618141816238,0,0,0.831192346452549,0,0.30648779579902,1.95309476578576,19.0566067708835,0,1.70845911054854,0,0.600182192168805,0.103052529238439,0.515281080091258,0,0.337552664482532,0,0.252433774244115,0.184099797284599,1.2931684545505,0,0.201504196455281,0,1.15956511897978,0,0,0,0,0,0,0,0,7.8224766164908,13.5080597020506,2.76269842704961,52.0092079395817,33.2064561568009,0,0,0,0,0,0,0,0,0,0,1.40241773803446,4.9388881359768,13.2307840246988,314.352486358141,535.640833089306,522.258277506361,0,8.48620225947483,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,1.01056513432752,1.38895653772983,0.951270761172991,0,0,1248.81265487528,150.46474248453,854.777814322476,0,0,0.141775097242386,0,0.290633938513962,0.766765358330422,2.46331618947972,2.55340458638356,1.24396869324463,8.2148373447668,0.88369703398466,0,0.381988425558278,0,1.71072446022705,0,0,0.285826432630578,0.112131084345361,0.43596006883328,0,0.258543431515556,3.57656445851882,0,0,0,0.514414748524284,0,0,2.00169191121407,4.88359444852299,0,0.977208552881205,2.48774364119782,0,10.8518175741451,6.10073421020206,4.59875759437462,602.037714173893,584.627254426995,383.717769859118,0,0,0,0,0.61642896765115,0,0,5.91092280605782,0.646882724578552,15.1444782810103,0,0,0,11.3911060427357,0,141.562327526017,200.438177666697,147.117507269793,0,0.500170521059677,0,0.623912584592421,0.356857977594324,1.41932173530541,2.45996971484698,0.601892199455438,0,3.10419213877515,0,0.368738337083406,0,0.195801157462741,0,136.466897241106,99.8756749790196,99.683538988417,0,0,0.30239029332968,1.24053903909388,0.153461973288062,0,4.10045277618243,1.02341449813341,1.44768529029247,2.96836132889982,0,0,0.0821271560138091,0,0,7.6141453242722,0.40101294060657,2.30202472339741,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0.769350375349168,0,0,131.480330862494,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0.511359764496605,0,0.165284915360978,0.192190067365106,0,0.2023155617111,0,1.5740617341532,0,2.15623506123262,3.19383618190213,0,1.66791797193528,40.2180931744995,0.372158369359667,1.89827654831236,5.90953601163857,1.79128453917934,0.42793898803392,0.636406495851874,7.06453776179307,0,0.54907405947211,0.117812402345686,4.24583211303964,1.58510321173008,0.842516912477962,0,1.21856744815642,0,0,0.282810863907425,2.26016233240486,0,21.8934861829602,6.57676327880644,0,0,3.24656603140326,1.54911749049875,0,0,0.294747123039363,2.85336841185,0,4.01104507065562,3.62224382255892,0,0,0,5.3624182042863,0,119.091907982626,0,0,0.443430153536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| ||
|short_description=p1@CD14 | |||
}} | }} |
Latest revision as of 02:26, 25 September 2015
Short description: | p1@CD14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD14_5end |
Coexpression cluster: | C803_Macrophage_CD14_Monocytederived_Eosinophils_Basophils_CD14CD16_Dendritic |
Association with transcript: | 241bp_to_uc003lgi.1_5end |
EntrezGene: | CD14 |
HGNC: | 1628 |
UniProt: | P08571 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.34e-37 | 48 |
phagocyte | 8.34e-37 | 48 |
myeloid leukocyte | 3.79e-36 | 72 |
classical monocyte | 6.94e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.94e-32 | 42 |
monopoietic cell | 1.51e-31 | 59 |
monocyte | 1.51e-31 | 59 |
monoblast | 1.51e-31 | 59 |
promonocyte | 1.51e-31 | 59 |
macrophage dendritic cell progenitor | 2.27e-30 | 61 |
myeloid lineage restricted progenitor cell | 8.01e-29 | 66 |
granulocyte monocyte progenitor cell | 1.11e-28 | 67 |
leukocyte | 2.82e-19 | 136 |
nongranular leukocyte | 1.80e-16 | 115 |
myeloid cell | 4.50e-15 | 108 |
common myeloid progenitor | 4.50e-15 | 108 |
hematopoietic lineage restricted progenitor cell | 1.66e-14 | 120 |
hematopoietic stem cell | 2.69e-10 | 168 |
hematopoietic oligopotent progenitor cell | 5.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.40e-09 | 161 |
hematopoietic cell | 2.13e-08 | 177 |
granulocyte | 8.09e-07 | 8 |