FFCP PHASE1:Hg19::chr5:139943969..139943978,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:139943969..139943978,-
|short_description=p5@APBB3
|description=CAGE_peak_5_at_APBB3_5end
|association_with_transcript=0bp_to_ENST00000503850_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10307 | |EntrezGene=10307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20708 | |HGNC=20708 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000503850_5end | |||
|cluster_id=chr5:139943969..139943978,- | |||
|description=CAGE_peak_5_at_APBB3_5end | |||
|id=chr5:139943969..139943978,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!7.43e-12!59;UBERON:0001049!1.29e-11!57;UBERON:0005068!1.29e-11!57;UBERON:0006241!1.29e-11!57;UBERON:0007135!1.29e-11!57;UBERON:0007023!1.35e-11!115;UBERON:0000955!6.05e-11!69;UBERON:0006238!6.05e-11!69;UBERON:0005743!1.01e-10!86;UBERON:0002780!2.42e-10!41;UBERON:0001890!2.42e-10!41;UBERON:0006240!2.42e-10!41;UBERON:0000073!2.66e-10!94;UBERON:0001016!2.66e-10!94;UBERON:0003080!9.83e-10!42;UBERON:0001017!1.65e-09!82;UBERON:0001893!2.04e-09!34;UBERON:0003075!3.02e-09!86;UBERON:0007284!3.02e-09!86;UBERON:0002791!7.68e-09!33;UBERON:0001869!8.03e-09!32;UBERON:0002346!1.08e-08!90;UBERON:0002020!1.50e-08!34;UBERON:0003528!1.50e-08!34;UBERON:0000153!5.72e-08!129;UBERON:0007811!5.72e-08!129;UBERON:0002619!1.32e-07!22;UBERON:0003056!1.91e-07!61;UBERON:0000033!2.46e-07!123;UBERON:0000956!8.93e-07!25;UBERON:0000203!8.93e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;1.12e-08;5!UBERON:0001893;4.26e-08;34!UBERON:0000073;3.47e-07;53!UBERON:0002616;3.47e-07;53!UBERON:0001950;3.73e-07;20!UBERON:0002780;5.26e-07;41!UBERON:0001890;5.26e-07;41!UBERON:0001896;6.12e-07;3!UBERON:0005290;6.12e-07;3!UBERON:0001869;9.37e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.84e-11,53;UBERON:0002616,3.84e-11,53;UBERON:0001049,2.05e-10,56;UBERON:0005068,2.05e-10,56;UBERON:0006241,2.05e-10,56;UBERON:0007135,2.05e-10,56;UBERON:0000955,1.79e-09,68;UBERON:0006238,1.79e-09,68;UBERON:0001893,7.55e-09,34;UBERON:0002780,9.56e-09,41;UBERON:0001890,9.56e-09,41;UBERON:0003080,9.56e-09,41;UBERON:0006240,9.56e-09,41;UBERON:0003075,1.03e-08,82;UBERON:0007284,1.03e-08,82;UBERON:0002021,1.21e-08,5;UBERON:0002346,3.60e-08,86;UBERON:0001869,1.44e-07,32;UBERON:0001017,1.54e-07,81;UBERON:0001950,3.16e-07,20 | |||
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| ||
|short_description=p5@APBB3 | |||
}} | }} |
Latest revision as of 02:03, 25 September 2015
Short description: | p5@APBB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APBB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503850_5end |
EntrezGene: | APBB3 |
HGNC: | 20708 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.84e-11 | 53 |
regional part of brain | 3.84e-11 | 53 |
neural tube | 2.05e-10 | 56 |
neural rod | 2.05e-10 | 56 |
future spinal cord | 2.05e-10 | 56 |
neural keel | 2.05e-10 | 56 |
brain | 1.79e-09 | 68 |
future brain | 1.79e-09 | 68 |
telencephalon | 7.55e-09 | 34 |
regional part of forebrain | 9.56e-09 | 41 |
forebrain | 9.56e-09 | 41 |
anterior neural tube | 9.56e-09 | 41 |
future forebrain | 9.56e-09 | 41 |
neural plate | 1.03e-08 | 82 |
presumptive neural plate | 1.03e-08 | 82 |
occipital lobe | 1.21e-08 | 5 |
neurectoderm | 3.60e-08 | 86 |
cerebral hemisphere | 1.44e-07 | 32 |
central nervous system | 1.54e-07 | 81 |
neocortex | 3.16e-07 | 20 |