FFCP PHASE1:Hg19::chr5:138941072..138941126,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:138941072..138941126,+
|short_description=p2@UBE2D2
|description=CAGE_peak_2_at_UBE2D2_5end
|association_with_transcript=-182bp_to_ENST00000510470_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7322 | |EntrezGene=7322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12475 | |HGNC=12475 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-182bp_to_ENST00000510470_5end | |||
|cluster_id=chr5:138941072..138941126,+ | |||
|description=CAGE_peak_2_at_UBE2D2_5end | |||
|id=chr5:138941072..138941126,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.44e-20!140;CL:0000037!9.08e-18!172;CL:0000566!9.08e-18!172;CL:0000988!1.66e-17!182;CL:0000766!1.91e-17!76;CL:0002057!2.82e-17!42;CL:0002031!4.29e-17!124;CL:0002032!1.53e-16!165;CL:0000837!1.53e-16!165;CL:0002087!2.01e-16!119;CL:0000860!1.05e-14!45;CL:0000557!2.81e-14!71;CL:0000839!1.00e-12!70;CL:0002009!2.55e-12!65;CL:0000763!3.52e-12!112;CL:0000049!3.52e-12!112;CL:0002194!4.62e-12!63;CL:0000576!4.62e-12!63;CL:0000040!4.62e-12!63;CL:0000559!4.62e-12!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.30e-13;33!CL:0002057;5.30e-13;33!CL:0000576;1.01e-10;48!CL:0000766;1.25e-09;69!CL:0000473;4.23e-09;39!CL:0000234;4.23e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.03e-22,136;CL:0000766,3.79e-19,72;CL:0000037,1.06e-18,168;CL:0002031,3.04e-18,120;CL:0000988,3.55e-18,177;CL:0002087,1.43e-17,115;CL:0002032,1.88e-17,161;CL:0000837,1.88e-17,161;CL:0000860,2.82e-17,42;CL:0002057,2.82e-17,42;CL:0000557,8.23e-16,67;CL:0000473,6.62e-15,48;CL:0000234,6.62e-15,48;CL:0000839,3.87e-14,66;CL:0002009,8.85e-14,61;CL:0002194,1.56e-13,59;CL:0000576,1.56e-13,59;CL:0000040,1.56e-13,59;CL:0000559,1.56e-13,59;CL:0000763,3.86e-13,108;CL:0000049,3.86e-13,108 | |||
|ontology_enrichment_development_v019=CL:0002057;8.12e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.02e-15!112;UBERON:0002390!1.10e-14!102;UBERON:0003061!1.10e-14!102;UBERON:0002371!5.61e-12!80;UBERON:0002405!2.93e-11!115;UBERON:0001474!3.25e-11!86;UBERON:0004765!1.52e-07!101;UBERON:0001434!1.52e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.00e-16,108;UBERON:0002390,7.19e-16,98;UBERON:0003061,7.19e-16,98;UBERON:0002405,1.31e-13,93;UBERON:0002371,3.42e-13,76;UBERON:0001474,2.62e-12,82;UBERON:0004765,7.77e-11,90;UBERON:0001434,1.96e-08,100 | |||
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| ||
|short_description=p2@UBE2D2 | |||
}} | }} |
Latest revision as of 00:41, 25 September 2015
Short description: | p2@UBE2D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBE2D2_5end |
Coexpression cluster: | NA |
Association with transcript: | -182bp_to_ENST00000510470_5end |
EntrezGene: | UBE2D2 |
HGNC: | 12475 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.03e-22 | 136 |
myeloid leukocyte | 3.79e-19 | 72 |
hematopoietic stem cell | 1.06e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 3.04e-18 | 120 |
hematopoietic cell | 3.55e-18 | 177 |
nongranular leukocyte | 1.43e-17 | 115 |
hematopoietic oligopotent progenitor cell | 1.88e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-17 | 161 |
classical monocyte | 2.82e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.82e-17 | 42 |
granulocyte monocyte progenitor cell | 8.23e-16 | 67 |
defensive cell | 6.62e-15 | 48 |
phagocyte | 6.62e-15 | 48 |
myeloid lineage restricted progenitor cell | 3.87e-14 | 66 |
macrophage dendritic cell progenitor | 8.85e-14 | 61 |
monopoietic cell | 1.56e-13 | 59 |
monocyte | 1.56e-13 | 59 |
monoblast | 1.56e-13 | 59 |
promonocyte | 1.56e-13 | 59 |
myeloid cell | 3.86e-13 | 108 |
common myeloid progenitor | 3.86e-13 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.00e-16 | 108 |
hematopoietic system | 7.19e-16 | 98 |
blood island | 7.19e-16 | 98 |
immune system | 1.31e-13 | 93 |
bone marrow | 3.42e-13 | 76 |
bone element | 2.62e-12 | 82 |
skeletal element | 7.77e-11 | 90 |
skeletal system | 1.96e-08 | 100 |