FFCP PHASE1:Hg19::chr5:137800912..137800941,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:137800912..137800941,+
|short_description=p7@EGR1
|description=CAGE_peak_7_at_EGR1_5end
|association_with_transcript=-227bp_to_ENST00000411801,ENST00000535...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1958 | |EntrezGene=1958 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3238 | |HGNC=3238 | ||
|TSSclassifier=strong | |||
|UniProt=B4DNX4,F5H5Y6 | |UniProt=B4DNX4,F5H5Y6 | ||
|association_with_transcript=-227bp_to_ENST00000411801,ENST00000535792_5end | |||
|cluster_id=chr5:137800912..137800941,+ | |||
|description=CAGE_peak_7_at_EGR1_5end | |||
|id=chr5:137800912..137800941,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.30e-07!143;DOID:305!5.19e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3307;5.29e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.62e-08,106;DOID:0050687,3.37e-07,143;DOID:3307,4.89e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@EGR1 | |||
}} | }} |
Latest revision as of 22:38, 24 September 2015
Short description: | p7@EGR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EGR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -227bp_to_ENST00000411801, ENST00000535792_5end |
EntrezGene: | EGR1 |
HGNC: | 3238 |
UniProt: | B4DNX4F5H5Y6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.62e-08 | 106 |
cell type cancer | 3.37e-07 | 143 |
teratoma | 4.89e-07 | 2 |