FFCP PHASE1:Hg19::chr5:133473765..133473784,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:133473765..133473784,+
|short_description=p7@TCF7
|description=CAGE_peak_7_at_TCF7_5end
|association_with_transcript=-10bp_to_ENST00000517478_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6932 | |EntrezGene=6932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11639 | |HGNC=11639 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000517478_5end | |||
|cluster_id=chr5:133473765..133473784,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_7_at_TCF7_5end | |||
|id=chr5:133473765..133473784,+ | |||
|ontology_enrichment_celltype=CL:0000084!3.98e-20!25;CL:0000827!3.98e-20!25;CL:0000791!1.97e-18!18;CL:0000789!1.97e-18!18;CL:0002420!1.97e-18!18;CL:0002419!1.97e-18!18;CL:0000790!1.97e-18!18;CL:0000838!1.17e-16!52;CL:0000542!3.55e-16!53;CL:0000051!3.55e-16!53;CL:0000625!2.00e-11!11;CL:0000624!2.94e-10!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.24e-26;25!CL:0000791;7.37e-24;18!CL:0000789;7.37e-24;18!CL:0002419;7.37e-24;18!CL:0000624;5.52e-19;6!CL:0000815;4.60e-15;2!CL:0000792;4.60e-15;2!CL:0002677;4.60e-15;2!CL:0000625;1.90e-10;11!CL:0000898;2.37e-10;3!CL:0000542;1.62e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.07e-26,25;CL:0000827,2.07e-26,25;CL:0000791,5.96e-24,18;CL:0000789,5.96e-24,18;CL:0002420,5.96e-24,18;CL:0002419,5.96e-24,18;CL:0000790,5.96e-24,18;CL:0000624,6.38e-19,6;CL:0000815,6.59e-15,2;CL:0000792,6.59e-15,2;CL:0002677,6.59e-15,2;CL:0000838,2.26e-14,52;CL:0000542,4.58e-14,53;CL:0000051,4.58e-14,53;CL:0000625,1.48e-10,11;CL:0000898,3.01e-10,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.37e-24;18!UBERON:0000358;8.77e-09;1!UBERON:0005425;2.20e-08;1!CL:0000051;1.62e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.07e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.29e-16;2!UBERON:0005058;3.29e-16;2!UBERON:0009113;3.29e-16;2!UBERON:0000029;2.20e-08;1!UBERON:0000941;2.20e-08;1!UBERON:0001301;2.20e-08;1!UBERON:0001785;2.20e-08;1!UBERON:0002464;2.20e-08;1!UBERON:0004904;2.20e-08;1!UBERON:0001021;2.20e-08;1!UBERON:0004177;5.44e-07;5!UBERON:0005057;5.44e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.53e-08,4;UBERON:0005058,1.53e-08,4;UBERON:0009113,1.53e-08,4;UBERON:0003295,1.53e-08,4;UBERON:0005562,1.53e-08,4;UBERON:0000029,1.71e-08,1;UBERON:0000941,1.84e-08,1;UBERON:0001785,1.84e-08,1;UBERON:0002464,1.84e-08,1;UBERON:0004904,1.84e-08,1;UBERON:0001021,1.84e-08,1;UBERON:0003902,1.84e-08,1;UBERON:0005425,1.84e-08,1;UBERON:0001301,2.46e-08,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,1.180258620683,0.786021525498329,1.64481199199607,0.167186495390678,1.30368906653436,0.473447805734733,1.94826728407911,0.222820913770347,1.17842362989935,0.443067789167242,0,0,0.130059347559878,0,0.276350017785848,0.579606171470105,2.66915813691709,2.1403266247177,5.22677619024884,0.113309342697566,0.383220493601921,2.74901956386104,2.02415753615602,0.318565414324097,0.651083453856419,0.950452044448374,1.35517607169996,1.66382594500744,0,1.89421801635213,0,0.80642697289893,0.802320587350522,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,1.32438929824395,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0.394061520403854,0.215627574859517,1.02674429023799,0.254094624222463,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.82707210449155,0.431428401637234,0.853820462427555,0.606255142892519,0,0,0.248107807818777,0,0,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.232420756919918,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.27470839445503,0.082509499920588,0,0,0,0.290012154876366,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0,1.4939787103167,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.450970258243478,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0,0.828478110694391,1.48849806543585,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0.231051332300676,0,0,0.596748666348824,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.187967835959707,0.193373663920732,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0.454672189309436,0.267964130156178,0,0,0.213233981900981,0,18.1494836639177,6.02124728669822,0,0.0636471582781649,0,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0.0898252021065869,2.34640942403454,0,0,0,2.81783311027437,0.641136984606466 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,1.180258620683,0.786021525498329,1.64481199199607,0.167186495390678,1.30368906653436,0.473447805734733,1.94826728407911,0.222820913770347,1.17842362989935,0.443067789167242,0,0,0.130059347559878,0,0.276350017785848,0.579606171470105,2.66915813691709,2.1403266247177,5.22677619024884,0.113309342697566,0.383220493601921,2.74901956386104,2.02415753615602,0.318565414324097,0.651083453856419,0.950452044448374,1.35517607169996,1.66382594500744,0,1.89421801635213,0,0.80642697289893,0.802320587350522,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,1.32438929824395,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0.394061520403854,0.215627574859517,1.02674429023799,0.254094624222463,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.82707210449155,0.431428401637234,0.853820462427555,0.606255142892519,0,0,0.248107807818777,0,0,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.232420756919918,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.27470839445503,0.082509499920588,0,0,0,0.290012154876366,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0,0.540031437238115,0,0,0,0,0,0,1.4939787103167,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.450970258243478,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0.164831716762333,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0,0.828478110694391,1.48849806543585,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0.231051332300676,0,0,0.596748666348824,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.187967835959707,0.193373663920732,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0.454672189309436,0.267964130156178,0,0,0.213233981900981,0,18.1494836639177,6.02124728669822,0,0.0636471582781649,0,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0.0898252021065869,2.34640942403454,0,0,0,2.81783311027437,0.641136984606466 | ||
|short_description=p7@TCF7 | |||
}} | }} |
Latest revision as of 07:44, 20 September 2015
Short description: | p7@TCF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TCF7_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -10bp_to_ENST00000517478_5end |
EntrezGene: | TCF7 |
HGNC: | 11639 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.07e-26 | 25 |
pro-T cell | 2.07e-26 | 25 |
mature alpha-beta T cell | 5.96e-24 | 18 |
alpha-beta T cell | 5.96e-24 | 18 |
immature T cell | 5.96e-24 | 18 |
mature T cell | 5.96e-24 | 18 |
immature alpha-beta T cell | 5.96e-24 | 18 |
CD4-positive, alpha-beta T cell | 6.38e-19 | 6 |
regulatory T cell | 6.59e-15 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.59e-15 | 2 |
naive regulatory T cell | 6.59e-15 | 2 |
lymphoid lineage restricted progenitor cell | 2.26e-14 | 52 |
lymphocyte | 4.58e-14 | 53 |
common lymphoid progenitor | 4.58e-14 | 53 |
CD8-positive, alpha-beta T cell | 1.48e-10 | 11 |
naive T cell | 3.01e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.53e-08 | 4 |
hemolymphoid system gland | 1.53e-08 | 4 |
thymic region | 1.53e-08 | 4 |
pharyngeal gland | 1.53e-08 | 4 |
thymus primordium | 1.53e-08 | 4 |
lymph node | 1.71e-08 | 1 |
cranial nerve II | 1.84e-08 | 1 |
cranial nerve | 1.84e-08 | 1 |
nerve trunk | 1.84e-08 | 1 |
nerve connecting eye with brain | 1.84e-08 | 1 |
nerve | 1.84e-08 | 1 |
retinal neural layer | 1.84e-08 | 1 |
presumptive neural retina | 1.84e-08 | 1 |
epididymis | 2.46e-08 | 1 |