FFCP PHASE1:Hg19::chr5:111312488..111312498,-: Difference between revisions
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|id=chr5:111312488..111312498,-
|short_description=p35@C5orf13
|description=CAGE_peak_35_at_C5orf13_5end
|association_with_transcript=129bp_to_ENST00000395634,NM_00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9315 | |EntrezGene=9315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16834 | |HGNC=16834 | ||
|TSSclassifier=strong | |||
|UniProt=Q16612,B7Z5D2 | |UniProt=Q16612,B7Z5D2 | ||
|association_with_transcript=129bp_to_ENST00000395634,NM_001142474,NM_001142475,uc011cvr.1,uc011cvs.1_5end | |||
|cluster_id=chr5:111312488..111312498,- | |||
|coexpression_cluster_id=C4323 | |||
|description=CAGE_peak_35_at_C5orf13_5end | |||
|id=chr5:111312488..111312498,- | |||
|ontology_enrichment_celltype=CL:0002620!2.03e-24!23;CL:0000057!3.85e-19!75;CL:0002579!2.82e-15!3;CL:0002580!6.25e-15!3;CL:0002334!6.80e-14!12;CL:0000055!1.12e-10!180;CL:0000136!1.67e-10!15;CL:0002617!3.86e-10!2;CL:0000667!1.20e-07!6;CL:0000058!1.20e-07!6;CL:0000138!1.20e-07!6;CL:0002615!3.08e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.64e-38;3!CL:0002579;1.64e-38;3!CL:0002334;4.95e-38;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.23e-38,3;CL:0002579,2.18e-38,3;CL:0002334,4.95e-38,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.08e-08!5;DOID:450!3.08e-08!5;DOID:66!3.08e-08!5;DOID:423!3.08e-08!5;DOID:0080000!3.08e-08!5;DOID:11722!3.08e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:3369;2.73e-29;1!DOID:1192;1.04e-10;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.78e-29,1;DOID:1192,8.99e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0003688!6.12e-20!6;UBERON:0002358!6.12e-20!6;UBERON:0003684!6.12e-20!6;UBERON:0001178!6.12e-20!6;UBERON:0002097!2.01e-15!40;UBERON:0002199!2.08e-13!45;UBERON:0002416!2.08e-13!45;UBERON:0000310!1.59e-11!10;UBERON:0001443!1.89e-10!11;UBERON:0004457!8.15e-10!12;UBERON:0000042!8.15e-10!12;UBERON:0002384!3.76e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.48e-20;6!UBERON:0002358;7.48e-20;6!UBERON:0003684;7.48e-20;6!UBERON:0001178;7.48e-20;6!UBERON:0004457;1.35e-13;9!UBERON:0000042;1.35e-13;9!UBERON:0000310;2.44e-12;10!UBERON:0001443;2.62e-11;11!UBERON:0001052;1.82e-08;4!UBERON:0004907;5.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.63e-20,6;UBERON:0002358,8.63e-20,6;UBERON:0003684,8.63e-20,6;UBERON:0001178,8.63e-20,6;UBERON:0000310,2.24e-12,10;UBERON:0001443,2.42e-11,11;UBERON:0004457,2.03e-10,12;UBERON:0000042,2.03e-10,12;UBERON:0001052,1.82e-08,4;UBERON:0004907,5.08e-07,5 | |||
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| ||
|short_description=p35@C5orf13 | |||
}} | }} |
Latest revision as of 17:43, 19 September 2015
Short description: | p35@C5orf13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_C5orf13_5end |
Coexpression cluster: | C4323_Preadipocyte_Ewing_Adipocyte_rectum_Fibroblast_basal_osteoclastoma |
Association with transcript: | 129bp_to_ENST00000395634, NM_001142474, NM_001142475, uc011cvr.1, uc011cvs.1_5end |
EntrezGene: | C5orf13 |
HGNC: | 16834 |
UniProt: | Q16612B7Z5D2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.23e-38 | 3 |
omentum preadipocyte | 2.18e-38 | 3 |
preadipocyte | 4.95e-38 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 8.63e-20 | 6 |
peritoneum | 8.63e-20 | 6 |
abdominal cavity | 8.63e-20 | 6 |
visceral peritoneum | 8.63e-20 | 6 |
breast | 2.24e-12 | 10 |
chest | 2.42e-11 | 11 |
cavity lining | 2.03e-10 | 12 |
serous membrane | 2.03e-10 | 12 |
rectum | 1.82e-08 | 4 |
lower digestive tract | 5.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.78e-29 | 1 |
peripheral nervous system neoplasm | 8.99e-11 | 3 |