FFCP PHASE1:Hg19::chr4:90228910..90228960,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:90228910..90228960,-
|short_description=p1@GPRIN3
|description=CAGE_peak_1_at_GPRIN3_5end
|association_with_transcript=200bp_to_ENST00000333209,NM_198281,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285513 | |EntrezGene=285513 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27733 | |HGNC=27733 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZVF9 | |UniProt=Q6ZVF9 | ||
|association_with_transcript=200bp_to_ENST00000333209,NM_198281,uc003hsm.1_5end | |||
|cluster_id=chr4:90228910..90228960,- | |||
|description=CAGE_peak_1_at_GPRIN3_5end | |||
|id=chr4:90228910..90228960,- | |||
|ontology_enrichment_celltype=CL:0000738!4.76e-29!140;CL:0002087!3.64e-27!119;CL:0002031!5.53e-24!124;CL:0002057!1.05e-19!42;CL:0002009!2.15e-19!65;CL:0000037!5.48e-19!172;CL:0000566!5.48e-19!172;CL:0000766!1.43e-18!76;CL:0002194!3.32e-18!63;CL:0000576!3.32e-18!63;CL:0000040!3.32e-18!63;CL:0000559!3.32e-18!63;CL:0002032!4.68e-18!165;CL:0000837!4.68e-18!165;CL:0000557!6.66e-18!71;CL:0000988!3.43e-17!182;CL:0000860!5.77e-17!45;CL:0000839!1.68e-15!70;CL:0000791!2.96e-13!18;CL:0000789!2.96e-13!18;CL:0002420!2.96e-13!18;CL:0002419!2.96e-13!18;CL:0000790!2.96e-13!18;CL:0000084!1.16e-11!25;CL:0000827!1.16e-11!25;CL:0000763!2.12e-10!112;CL:0000049!2.12e-10!112;CL:0000625!1.96e-08!11;CL:0000542!4.70e-08!53;CL:0000051!4.70e-08!53;CL:0000838!6.41e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.11e-16;39!CL:0000234;1.11e-16;39!CL:0000860;1.28e-15;33!CL:0002057;1.28e-15;33!CL:0000791;3.36e-15;18!CL:0000789;3.36e-15;18!CL:0002419;3.36e-15;18!CL:0000084;8.17e-14;25!CL:0000576;1.11e-13;48!CL:0000766;1.33e-10;69!CL:0002087;1.60e-10;104!CL:0000625;1.45e-09;11!CL:0000738;7.31e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.40e-36,136;CL:0002087,2.44e-35,115;CL:0002031,3.73e-30,120;CL:0000473,3.88e-27,48;CL:0000234,3.88e-27,48;CL:0002009,8.10e-27,61;CL:0002194,2.46e-25,59;CL:0000576,2.46e-25,59;CL:0000040,2.46e-25,59;CL:0000559,2.46e-25,59;CL:0000766,6.03e-24,72;CL:0000037,6.18e-24,168;CL:0000557,4.46e-23,67;CL:0000860,9.53e-23,42;CL:0002057,9.53e-23,42;CL:0002032,1.25e-22,161;CL:0000837,1.25e-22,161;CL:0000988,9.72e-21,177;CL:0000839,2.58e-20,66;CL:0000791,3.28e-15,18;CL:0000789,3.28e-15,18;CL:0002420,3.28e-15,18;CL:0002419,3.28e-15,18;CL:0000790,3.28e-15,18;CL:0000084,6.95e-14,25;CL:0000827,6.95e-14,25;CL:0000763,2.29e-13,108;CL:0000049,2.29e-13,108;CL:0000625,1.38e-09,11;CL:0000542,2.93e-09,53;CL:0000051,2.93e-09,53;CL:0000838,4.21e-09,52;CL:0002393,4.04e-07,9;CL:0002397,4.04e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.98e-16;42!CL:0000790;3.36e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.77e-27!115;UBERON:0002390!1.84e-21!102;UBERON:0003061!1.84e-21!102;UBERON:0002193!2.69e-21!112;UBERON:0002371!2.05e-14!80;UBERON:0001049!4.76e-13!57;UBERON:0005068!4.76e-13!57;UBERON:0006241!4.76e-13!57;UBERON:0007135!4.76e-13!57;UBERON:0002405!1.53e-12!115;UBERON:0001474!1.88e-12!86;UBERON:0001017!1.53e-11!82;UBERON:0005743!1.78e-11!86;UBERON:0000955!9.97e-11!69;UBERON:0006238!9.97e-11!69;UBERON:0002616!1.43e-10!59;UBERON:0003080!6.55e-10!42;UBERON:0002780!7.91e-10!41;UBERON:0001890!7.91e-10!41;UBERON:0006240!7.91e-10!41;UBERON:0000073!1.43e-09!94;UBERON:0001016!1.43e-09!94;UBERON:0003075!2.59e-09!86;UBERON:0007284!2.59e-09!86;UBERON:0004765!2.13e-08!101;UBERON:0001434!2.13e-08!101;UBERON:0002346!5.46e-08!90;UBERON:0002020!2.43e-07!34;UBERON:0003528!2.43e-07!34;UBERON:0001893!3.74e-07!34;UBERON:0002791!5.46e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.38e-08;114!UBERON:0002780;5.66e-08;41!UBERON:0001890;5.66e-08;41!UBERON:0000073;1.04e-07;53!UBERON:0002616;1.04e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.62e-27,114;UBERON:0002390,5.12e-26,98;UBERON:0003061,5.12e-26,98;UBERON:0002193,4.16e-24,108;UBERON:0002405,1.38e-19,93;UBERON:0002371,6.85e-19,76;UBERON:0001474,6.56e-16,82;UBERON:0001049,1.82e-13,56;UBERON:0005068,1.82e-13,56;UBERON:0006241,1.82e-13,56;UBERON:0007135,1.82e-13,56;UBERON:0004765,1.15e-12,90;UBERON:0000073,1.25e-12,53;UBERON:0002616,1.25e-12,53;UBERON:0002780,1.71e-10,41;UBERON:0001890,1.71e-10,41;UBERON:0003080,1.71e-10,41;UBERON:0006240,1.71e-10,41;UBERON:0001434,2.36e-10,100;UBERON:0001017,6.54e-10,81;UBERON:0000955,1.25e-09,68;UBERON:0006238,1.25e-09,68;UBERON:0003075,2.40e-08,82;UBERON:0007284,2.40e-08,82;UBERON:0001016,5.67e-08,89;UBERON:0003528,1.18e-07,34;UBERON:0002020,1.18e-07,34;UBERON:0001893,1.90e-07,34;UBERON:0002346,2.73e-07,86;UBERON:0002791,5.31e-07,32;UBERON:0001869,6.89e-07,32 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0.0821005894499457,0,10.6208354749204,47.2110159659572,21.0549927709863,0,0,0,0.0774672005803016,0,0,16.6198622559563,38.7050783617373,25.1732610030388,1.79132379391939,5.83008598834163,5.15151135268373,20.5011516679186,26.0734401145279,28.1397510977867,9.76201955003875,5.34518254428373,5.88442104700697,9.49384894663097,4.09857130446561,4.7296445977717,12.4108445065183,5.80936215225443,17.6054432572644,14.4946601447806,11.7349644524874,8.7642158933583,11.0190201253525,12.5162320559677,8.95071976118658,6.26717470354761,7.97854630486527,8.09827026012119,3.77272010217159,3.97169657283798,6.85104473895132,7.28621129244555,6.77927793946262,5.86409880703815,5.44859552370032,3.68277635987565,4.1140110367315,11.1965301745329,5.52771179909113,4.61249020118427,4.6054738770063,5.10601435661121,2.73233497385036,18.2408155994399,11.3382506003481,13.5171473785829,0,1.63841583378639,0,1.28019066769952,0,1.14950487990897,0,0.954053754535364,1.1384259382189,2.93618594685469,4.20500550937752,2.64342657158052,34.7515309048552,0.790152254325231,83.9950718386067,119.868282638495,82.4462010988032,12.7061736496915,10.4295125322749,13.2565385605725,7.79306913631645,16.6001580758909,36.5311325268798,27.9132707175363,29.2468172866217,24.7216247070553,24.0609792985775,13.3194702728978,12.1594007825773,13.3309419438124,8.89719378972362,13.6445822325754,4.18142095219907,20.3956816855619,52.8844281170651,44.6715679127419,26.3140479700283,17.2025323735012,9.76625180784628,12.3558765778289,14.0034860742329,16.8942326723832,14.9916871862815,18.2318484073893,13.9591759476578,71.7720005880047,102.1621547893,52.8609074172216,0,0,0.255725123687061,0,0,0,0,0,1.22895262313288,0.221729397462564,1.75669571386252,6.35248516163906,0,0,7.7891374477124,10.7960437125546,13.2957960518865,1.43094374583205,1.14398982156026,1.48583000531826,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0.825354125820202,0.417989933073621,0.258416759169329,0.35576626268671,3.3472061276467,1.20848795132744,0.760272105718513,3.1728067481262,0.735326160691737,2.43042584364528,0.0892997282840798,0,0.112611480483322,3.06633274931766,0.949265659568129,0.732806975721629,3.9534125230819,3.87780264148325,0,0,0,0.132409180813219,0,1.06400514659507,0,0,0.49333509683432,0.311211035399766,0.808264032418128,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,2.94848165003288,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0.234817388471643,1.15493158208859,0.462985512576611,0.570762456703795,0,0,10.0948972495833,37.2066781571388,30.618019431478,0,0,0,0,0,0,0,0.528290604079356,0.829312462163088,0.432359860250884,0,3.4923841860693,1.52795370223311,5.86087236050235,1.71072446022705,1.13110241973656,2.40274446275134,3.42991719156694,0,0,0.07333828582095,7.10994436667778,0,0.845302752556,0.797814349754612,0,0,0,0.266422179016099,0,0,0,0,0,0,4.22015127883421,6.10073421020206,9.59740715347748,13.378615870531,13.5609414686674,21.0833939483032,0,0,0,0,0,0,14.3468984311715,68.9607660706745,100.913705034254,65.8399776115109,0.508189248444927,2.60279707715243,1.54657762555539,0.335032530668698,1.27587750330633,1.49801404789436,0,2.90090859405225,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,29.1542916833271,34.5142721309787,24.8675209682025,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0.73886140225013,0,0.170093705276516,1.29549549661284,3.08454505380579,0.541892875087706,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0,0.650756789328606,4.73988653579522,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0.844430541190656,0,0,0,0,0,0,3.48332062874083,0,0,0,0,4.56702848308952,5.35246044999663,6.26611905891579,7.14695326373367,10.2840568271549,5.18778648954174,11.3406601820004,7.13812658664843,0.106824071127473,5.77487913158015,0,2.04383492638291,0,0,0,1.99579371432817,0,0,0,0,0,0,0,0,0,0.605399121573143,5.53600108997424,0,0,0,0,0.781552381608161,0,0,0,0,0,25.0768324147015,9.669539831945,0,48.8122023135355,0,0,0.593929361665277,0,0.994147647766298,2.95405774462077,0.111308705022906,5.93293947216335,0.422250816255987,3.18796781201712,10.7750727057148,2.01546198283421,0.102268682502155,0.123084805461069,0,0,7.16084698702437,0,1.67693789582787,9.57932369387759,0,3.87733098438087,3.52518773015035,1.99613798001194,0.260427761085233,0,1.44999915086959,0,0,0.472775363535873,1.72371686620732,0,5.72962483279864,25.6865001886013,6.99459344027366,19.8356257212208,21.0100593869327,12.41299999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| ||
|short_description=p1@GPRIN3 | |||
}} | }} |
Latest revision as of 08:32, 19 September 2015
Short description: | p1@GPRIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPRIN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 200bp_to_ENST00000333209, NM_198281, uc003hsm.1_5end |
EntrezGene: | GPRIN3 |
HGNC: | 27733 |
UniProt: | Q6ZVF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.62e-27 | 114 |
hematopoietic system | 5.12e-26 | 98 |
blood island | 5.12e-26 | 98 |
hemolymphoid system | 4.16e-24 | 108 |
immune system | 1.38e-19 | 93 |
bone marrow | 6.85e-19 | 76 |
bone element | 6.56e-16 | 82 |
neural tube | 1.82e-13 | 56 |
neural rod | 1.82e-13 | 56 |
future spinal cord | 1.82e-13 | 56 |
neural keel | 1.82e-13 | 56 |
skeletal element | 1.15e-12 | 90 |
regional part of nervous system | 1.25e-12 | 53 |
regional part of brain | 1.25e-12 | 53 |
regional part of forebrain | 1.71e-10 | 41 |
forebrain | 1.71e-10 | 41 |
anterior neural tube | 1.71e-10 | 41 |
future forebrain | 1.71e-10 | 41 |
skeletal system | 2.36e-10 | 100 |
central nervous system | 6.54e-10 | 81 |
brain | 1.25e-09 | 68 |
future brain | 1.25e-09 | 68 |
neural plate | 2.40e-08 | 82 |
presumptive neural plate | 2.40e-08 | 82 |
nervous system | 5.67e-08 | 89 |
brain grey matter | 1.18e-07 | 34 |
gray matter | 1.18e-07 | 34 |
telencephalon | 1.90e-07 | 34 |
neurectoderm | 2.73e-07 | 86 |
regional part of telencephalon | 5.31e-07 | 32 |
cerebral hemisphere | 6.89e-07 | 32 |