FFCP PHASE1:Hg19::chr5:94983748..94983760,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=317671 | |EntrezGene=317671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29587 | |HGNC=29587 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000504893_5end | |association_with_transcript=0bp_to_ENST00000504893_5end | ||
|cluster_id=chr5:94983748..94983760,+ | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_2_at_RFESD_5end | |description=CAGE_peak_2_at_RFESD_5end |
Latest revision as of 07:38, 19 September 2015
Short description: | p2@RFESD |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RFESD_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000504893_5end |
EntrezGene: | RFESD |
HGNC: | 29587 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@RFESD |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.09e-31 | 5 |
basophil mast progenitor cell | 4.09e-31 | 5 |
myeloid cell | 2.88e-19 | 108 |
common myeloid progenitor | 2.88e-19 | 108 |
endocrine cell | 3.05e-17 | 9 |
hematopoietic oligopotent progenitor cell | 4.30e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.30e-16 | 161 |
hematopoietic stem cell | 3.11e-15 | 168 |
erythroid lineage cell | 1.82e-14 | 2 |
erythroblast | 1.82e-14 | 2 |
Showing 1 to 10 of 18 entries
Ontology term | p-value | n |
---|---|---|
blood | 3.09e-10 | 15 |
haemolymphatic fluid | 3.09e-10 | 15 |
organism substance | 3.09e-10 | 15 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.55e-50 | 8 |
leukemia | 3.58e-38 | 39 |
myeloid leukemia | 3.56e-32 | 31 |
hematologic cancer | 2.01e-28 | 51 |
immune system cancer | 2.01e-28 | 51 |
organ system cancer | 1.84e-08 | 137 |
chronic myeloid leukemia | 1.15e-07 | 1 |
Showing 1 to 7 of 7 entries