FFCP PHASE1:Hg19::chr4:86525321..86525343,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:86525321..86525343,+
|short_description=p19@ARHGAP24
|description=CAGE_peak_19_at_ARHGAP24_5end
|association_with_transcript=15bp_to_ENST00000512201_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83478 | |EntrezGene=83478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |HGNC=25361 | ||
|TSSclassifier=strong | |||
|UniProt=D6RHH1 | |UniProt=D6RHH1 | ||
|association_with_transcript=15bp_to_ENST00000512201_5end | |||
|cluster_id=chr4:86525321..86525343,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_19_at_ARHGAP24_5end | |||
|id=chr4:86525321..86525343,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000785;1.07e-23;1!CL:0000819;1.07e-23;1!CL:0000945;3.68e-15;24!CL:0002144;9.66e-09;3!CL:0000542;7.11e-08;53!CL:0000236;8.31e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.07e-23,1;CL:0000945,3.68e-15,24;CL:0000826,3.68e-15,24;CL:0000785,1.48e-12,2;CL:0000955,1.48e-12,2;CL:0000818,1.48e-12,2;CL:0000954,1.48e-12,2;CL:0000816,1.48e-12,2;CL:0000542,1.20e-10,53;CL:0000051,1.20e-10,53;CL:0000817,8.31e-09,3;CL:0002144,9.66e-09,3;CL:0000236,2.52e-07,14;CL:0000838,3.39e-07,52;CL:0002087,7.83e-07,115 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.04e-13;7!CL:0000954;1.48e-12;2!CL:0000051;7.11e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.07e-23;1!DOID:8675;1.07e-23;1!DOID:12603;1.34e-23;1!DOID:0060058;1.37e-20;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.07e-23,1;DOID:8675,1.07e-23,1;DOID:12603,1.34e-23,1;DOID:0060058,1.47e-20,10;DOID:2531,2.40e-07,51;DOID:0060083,2.40e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.98e-15!115;UBERON:0002298!3.59e-11!8;UBERON:0002133!5.63e-09!2;UBERON:0001875!1.48e-08!2;UBERON:0006514!1.48e-08!2;UBERON:0001870!1.86e-08!2;UBERON:0001049!5.63e-08!57;UBERON:0005068!5.63e-08!57;UBERON:0006241!5.63e-08!57;UBERON:0007135!5.63e-08!57;UBERON:0003075!2.76e-07!86;UBERON:0007284!2.76e-07!86;UBERON:0002346!8.10e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.54e-30;3!UBERON:0004177;2.30e-18;5!UBERON:0005057;2.30e-18;5!UBERON:0010523;9.66e-09;3!UBERON:0001915;9.66e-09;3!UBERON:0001982;9.66e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.50e-30,3;UBERON:0004854,6.50e-30,3;UBERON:0009034,6.50e-30,3;UBERON:0002095,6.50e-30,3;UBERON:0004782,6.50e-30,3;UBERON:0003281,6.50e-30,3;UBERON:0009664,6.50e-30,3;UBERON:0002296,6.50e-30,3;UBERON:0005602,6.50e-30,3;UBERON:0001179,6.50e-30,3;UBERON:0006293,6.50e-30,3;UBERON:0004177,1.91e-13,7;UBERON:0005057,1.91e-13,7;UBERON:0000945,6.88e-12,8;UBERON:0010039,6.88e-12,8;UBERON:0010523,9.66e-09,3;UBERON:0001915,9.66e-09,3;UBERON:0001982,9.66e-09,3;UBERON:0004457,3.07e-08,12;UBERON:0000042,3.07e-08,12;UBERON:0003887,3.07e-08,12 | |||
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| ||
|short_description=p19@ARHGAP24 | |||
}} | }} |
Latest revision as of 03:28, 19 September 2015
Short description: | p19@ARHGAP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ARHGAP24_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | 15bp_to_ENST00000512201_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | D6RHH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.07e-23 | 1 |
lymphocyte of B lineage | 3.68e-15 | 24 |
pro-B cell | 3.68e-15 | 24 |
mature B cell | 1.48e-12 | 2 |
pre-B-II cell | 1.48e-12 | 2 |
transitional stage B cell | 1.48e-12 | 2 |
small pre-B-II cell | 1.48e-12 | 2 |
immature B cell | 1.48e-12 | 2 |
lymphocyte | 1.20e-10 | 53 |
common lymphoid progenitor | 1.20e-10 | 53 |
precursor B cell | 8.31e-09 | 3 |
capillary endothelial cell | 9.66e-09 | 3 |
B cell | 2.52e-07 | 14 |
lymphoid lineage restricted progenitor cell | 3.39e-07 | 52 |
nongranular leukocyte | 7.83e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.50e-30 | 3 |
gastrointestinal system mesentery | 6.50e-30 | 3 |
stomach region | 6.50e-30 | 3 |
mesentery | 6.50e-30 | 3 |
gastrointestinal system serosa | 6.50e-30 | 3 |
mesentery of stomach | 6.50e-30 | 3 |
gut mesentery | 6.50e-30 | 3 |
dorsal mesentery | 6.50e-30 | 3 |
dorsal mesogastrium | 6.50e-30 | 3 |
peritoneal cavity | 6.50e-30 | 3 |
spleen primordium | 6.50e-30 | 3 |
hemopoietic organ | 1.91e-13 | 7 |
immune organ | 1.91e-13 | 7 |
stomach | 6.88e-12 | 8 |
food storage organ | 6.88e-12 | 8 |
microcirculatory vessel | 9.66e-09 | 3 |
endothelium of capillary | 9.66e-09 | 3 |
capillary | 9.66e-09 | 3 |
cavity lining | 3.07e-08 | 12 |
serous membrane | 3.07e-08 | 12 |
intraembryonic coelom | 3.07e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.07e-23 | 1 |
lymphosarcoma | 1.07e-23 | 1 |
acute leukemia | 1.34e-23 | 1 |
lymphoma | 1.47e-20 | 10 |
hematologic cancer | 2.40e-07 | 51 |
immune system cancer | 2.40e-07 | 51 |