FFCP PHASE1:Hg19::chr4:76598434..76598445,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:76598434..76598445,-
|short_description=p6@G3BP2
|description=CAGE_peak_6_at_G3BP2_5end
|association_with_transcript=88bp_to_ENST00000507701_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9908 | |EntrezGene=9908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30291 | |HGNC=30291 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=88bp_to_ENST00000507701_5end | |||
|cluster_id=chr4:76598434..76598445,- | |||
|coexpression_cluster_id=C1390 | |||
|description=CAGE_peak_6_at_G3BP2_5end | |||
|id=chr4:76598434..76598445,- | |||
|ontology_enrichment_celltype=CL:0000738!7.41e-24!140;CL:0000037!1.31e-21!172;CL:0000566!1.31e-21!172;CL:0000988!1.03e-20!182;CL:0002032!4.82e-19!165;CL:0000837!4.82e-19!165;CL:0002031!6.26e-18!124;CL:0002087!4.04e-17!119;CL:0000838!2.09e-11!52;CL:0000542!3.77e-11!53;CL:0000051!3.77e-11!53;CL:0000763!5.53e-09!112;CL:0000049!5.53e-09!112;CL:0000766!8.61e-09!76;CL:0000134!1.43e-08!358;CL:0000084!1.44e-08!25;CL:0000827!1.44e-08!25;CL:0000557!9.51e-08!71;CL:0002320!1.18e-07!365;CL:0000791!3.13e-07!18;CL:0000789!3.13e-07!18;CL:0002420!3.13e-07!18;CL:0002419!3.13e-07!18;CL:0000790!3.13e-07!18;CL:0000839!6.86e-07!70;CL:0002057!7.00e-07!42;CL:0002009!8.70e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.59e-13;6!CL:0000791;7.96e-13;18!CL:0000789;7.96e-13;18!CL:0002419;7.96e-13;18!CL:0000084;7.02e-12;25!CL:0000453;1.19e-10;5!CL:0000623;5.04e-08;3!CL:0000767;1.30e-07;3!CL:0000542;3.17e-07;53!CL:0000898;3.37e-07;3!CL:0000226;4.11e-07;3!CL:0000842;4.11e-07;3!CL:0000094;7.64e-07;8!CL:0000081;9.94e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.66e-28,136;CL:0000988,3.90e-25,177;CL:0000037,1.50e-23,168;CL:0002032,2.08e-19,161;CL:0000837,2.08e-19,161;CL:0002031,2.44e-17,120;CL:0002087,2.61e-16,115;CL:0000624,9.71e-14,6;CL:0000791,8.63e-13,18;CL:0000789,8.63e-13,18;CL:0002420,8.63e-13,18;CL:0002419,8.63e-13,18;CL:0000790,8.63e-13,18;CL:0000084,8.78e-12,25;CL:0000827,8.78e-12,25;CL:0000838,1.76e-11,52;CL:0000542,3.67e-11,53;CL:0000051,3.67e-11,53;CL:0000453,8.43e-11,5;CL:0000766,2.86e-09,72;CL:0000763,3.11e-09,108;CL:0000049,3.11e-09,108;CL:0000623,5.10e-08,3;CL:0000825,5.10e-08,3;CL:0000134,1.12e-07,354;CL:0000767,1.49e-07,3;CL:0000898,2.06e-07,3;CL:0000557,2.57e-07,67;CL:0000226,2.71e-07,3;CL:0000842,2.71e-07,3;CL:0002320,3.04e-07,361;CL:0000094,8.20e-07,8;CL:0000081,9.67e-07,11;CL:0000860,9.95e-07,42;CL:0002057,9.95e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;7.96e-13;18!CL:0000051;3.17e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.51e-13!102;UBERON:0003061!4.51e-13!102;UBERON:0002193!2.73e-10!112;UBERON:0000178!8.23e-08!15;UBERON:0000179!8.23e-08!15;UBERON:0000463!8.23e-08!15;UBERON:0002371!2.32e-07!80;UBERON:0002384!8.18e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.10e-15;15!UBERON:0000179;7.10e-15;15!UBERON:0000463;7.10e-15;15!UBERON:0002390;6.07e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.15e-16,98;UBERON:0003061,2.15e-16,98;UBERON:0000178,4.01e-15,15;UBERON:0000179,4.01e-15,15;UBERON:0000463,4.01e-15,15;UBERON:0002193,6.20e-15,108;UBERON:0003081,1.10e-07,203;UBERON:0002371,1.60e-07,76;UBERON:0002405,3.31e-07,93;UBERON:0002384,3.87e-07,371 | |||
|phase1_expression=0,0.214100523890983,0.563817616383885,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0.436882744260345,0,0.247532705920093,0.331397375727916,0,0,2.19093027116212,0.487932798790507,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.393553906568396,3.93364276848904,8.06041736004147,2.01260960310899,0,0.30120591877825,0,0.619737604642413,0.284338464974843,1.76160263600908,1.66198622559563,2.00544447470142,1.51907609501096,0.447830948479849,0,0.257575567634187,0.581592955118259,0,1.69808842831471,0.929716147622738,0.822335776043652,3.09706370895104,1.7261543539329,0.768482119587302,0.236482229888585,0.344745680736619,0,0,0.752969358170419,1.09162460023138,0.898893937780338,0.612167784741805,2.24650318953266,1.27867425159808,0.659702600373432,0.797854630486527,0.852449501065388,0.290209238628584,0.56738522469114,0,2.00998932205395,0.521482918420201,1.52032191293582,1.21079900526674,1.10483290796269,1.58231193720442,0.422510572623884,0.850417199860174,1.04829322754188,0.112328631146495,0,0,0.285012743741249,0,0.365328307529268,0,0.546138611262131,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0.954053754535364,2.27685187643779,2.34894875748376,3.05818582500183,3.96513985737078,4.48406850385229,0.790152254325231,5.90129310341499,7.46720449223413,11.5136839439725,0.83593247695339,1.95553359980154,0.946895611469467,0,2.89667187901451,5.30290633454707,1.55073726208535,2.16643091012012,2.17755243533648,2.47112760363769,0.986627427622057,0.829050053357545,1.73881851441031,1.77943875794473,0.802622484269139,1.04535523804977,1.58633079776593,3.44898444241729,0,2.27717722817553,0.95569624297229,0.651083453856419,0,0.150575119077773,0.383959833463255,1.24930726552346,0.236777252044017,0.821127996921047,12.0964045934839,7.48832548193821,8.97911304073354,0,2.01210257911091,0.255725123687061,1.44575660953827,0,0.289693037921647,0.795285947051099,0,0,0.443458794925128,0.175669571386252,0.261958150995425,0,0.370784442784429,0.97364218096405,0.348259474598534,0.664789802594326,0.476981248610684,1.71598473234038,0.371457501329565,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,1.03366703667732,0,0,0.402829317109147,0,0.24406205754817,1.10298924103761,0,0.714397826272638,0.22452937262617,0.225222960966644,0,0,0.549605231791222,2.63560834872127,0,0,0,0.506522046658319,1.32409180813219,0.286836620748814,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.404132016209064,0,0,0,0,0,0,0.149448680551801,0,0,0,0.61246251376468,0.122834317311768,0.309977343527296,0,0.494533858557114,0,0,0,0.125118519871964,0.554128230968366,0.877955241761676,0.30648779579902,0.600952235626387,0.567160915800105,0.538168907066586,0.427114777637135,0.635795703478686,0.600182192168805,0.309157587715317,0.515281080091258,0,0.675105328965065,0.389748020644795,0.504867548488229,0.184099797284599,0.646584227275248,0,0.302256294682921,0,0.386521706326594,0.272746120590835,0.860413786167011,0.243947412259191,0.265059536642971,0,0.414644220061482,0.504641701751257,0.72995471815166,1.56449532329816,0,0,0,0,0.118306800039844,0.337169380156203,0.482022059766964,0.441175890929576,0.217879444092406,0.71181185733329,0.269662616320329,0.392442930250692,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0.441463099414651,0.122988438543114,0.343135620597051,0.219500570817251,0,0,0.185176890317059,0,0,0,0.115930404975077,0.70445216541493,0.288732895522148,0,0,0.790204397959275,0,0,0.936017060556951,0.148631162288728,0.93733833986777,0.335964256397719,0.141775097242386,0.447792613514241,0.290633938513962,0,29.0671310358607,0.968532774145487,1.24396869324463,0.288239906833923,1.13618190083742,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0.4400297149257,0.904902010304444,0,0,0.531876233169741,1.04007436911366,0,0,0.266422179016099,0.142977993658148,0,1.64648067356154,0.325736184293735,0.710783897485092,0,0.904318131178758,1.74306691720059,0.499864955910285,0,0.502257091432126,2.10833939483032,0.479249710983165,0,0,0.289562613335158,0,0.537182889719687,1.00876629594175,10.4426302907021,7.76259269494262,7.18721003166591,0,1.30139853857622,0,0.167516265334349,0,0.749007023947182,0,2.07207756718018,0,0,0,0.207970861530807,0.535286966391485,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,3.51505644408909,1.72571360654893,3.73546452312055,0,0,0,1.24053903909388,0,0,0.512556597022804,0,0.804269605718038,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0,0.362578348774867,0,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,1.13733384070897,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0.165018999841176,0,0.650060246036521,0,0.096670718292122,0,0,0,0.429680979473094,0,0.340906509664404,0.356128142586949,0.495854746082934,0,0.255225424989168,0.4046311234222,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0.37064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| ||
|short_description=p6@G3BP2 | |||
}} | }} |
Latest revision as of 16:38, 18 September 2015
Short description: | p6@G3BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_G3BP2_5end |
Coexpression cluster: | C1390_Mast_CD8_Natural_Basophils_CD34_CD4_CD19 |
Association with transcript: | 88bp_to_ENST00000507701_5end |
EntrezGene: | G3BP2 |
HGNC: | 30291 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.15e-16 | 98 |
blood island | 2.15e-16 | 98 |
blood | 4.01e-15 | 15 |
haemolymphatic fluid | 4.01e-15 | 15 |
organism substance | 4.01e-15 | 15 |
hemolymphoid system | 6.20e-15 | 108 |
lateral plate mesoderm | 1.10e-07 | 203 |
bone marrow | 1.60e-07 | 76 |
immune system | 3.31e-07 | 93 |
connective tissue | 3.87e-07 | 371 |