FFCP PHASE1:Hg19::chr4:48782239..48782250,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:48782239..48782250,-
|short_description=p5@FRYL
|description=CAGE_peak_5_at_FRYL_5end
|association_with_transcript=14bp_to_ENST00000507711_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285527 | |EntrezGene=285527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29127 | |HGNC=29127 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2S2 | |UniProt=F2Z2S2 | ||
|association_with_transcript=14bp_to_ENST00000507711_5end | |||
|cluster_id=chr4:48782239..48782250,- | |||
|description=CAGE_peak_5_at_FRYL_5end | |||
|id=chr4:48782239..48782250,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.20e-13!82;UBERON:0000073!6.29e-13!94;UBERON:0001016!6.29e-13!94;UBERON:0000955!7.90e-13!69;UBERON:0006238!7.90e-13!69;UBERON:0005743!1.38e-12!86;UBERON:0001049!3.78e-12!57;UBERON:0005068!3.78e-12!57;UBERON:0006241!3.78e-12!57;UBERON:0007135!3.78e-12!57;UBERON:0002616!3.21e-11!59;UBERON:0002780!5.39e-11!41;UBERON:0001890!5.39e-11!41;UBERON:0006240!5.39e-11!41;UBERON:0000153!1.12e-10!129;UBERON:0007811!1.12e-10!129;UBERON:0003080!2.47e-10!42;UBERON:0001893!6.70e-10!34;UBERON:0002020!7.21e-10!34;UBERON:0003528!7.21e-10!34;UBERON:0002791!1.06e-09!33;UBERON:0000033!1.60e-09!123;UBERON:0003075!1.66e-09!86;UBERON:0007284!1.66e-09!86;UBERON:0002346!1.82e-09!90;UBERON:0000924!1.96e-09!173;UBERON:0006601!1.96e-09!173;UBERON:0004121!2.30e-09!169;UBERON:0001869!9.91e-09!32;UBERON:0003056!3.06e-08!61;UBERON:0000956!3.40e-08!25;UBERON:0000203!3.40e-08!25;UBERON:0001950!8.14e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.32e-10;41!UBERON:0001890;3.32e-10;41!UBERON:0000073;5.07e-09;53!UBERON:0002616;5.07e-09;53!UBERON:0001893;1.56e-08;34!UBERON:0002791;4.11e-08;32!UBERON:0000956;6.62e-08;25!UBERON:0000203;6.62e-08;25!UBERON:0005162;5.17e-07;2!UBERON:0000122;5.17e-07;2!UBERON:0003528;7.38e-07;34!UBERON:0002020;7.38e-07;34!UBERON:0001869;9.30e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,5.33e-16,104;UBERON:0002346,6.27e-16,86;UBERON:0003075,1.81e-15,82;UBERON:0007284,1.81e-15,82;UBERON:0001049,2.26e-15,56;UBERON:0005068,2.26e-15,56;UBERON:0006241,2.26e-15,56;UBERON:0007135,2.26e-15,56;UBERON:0002780,1.90e-13,41;UBERON:0001890,1.90e-13,41;UBERON:0003080,1.90e-13,41;UBERON:0006240,1.90e-13,41;UBERON:0000073,7.92e-13,53;UBERON:0002616,7.92e-13,53;UBERON:0010314,2.94e-12,132;UBERON:0001016,3.75e-12,89;UBERON:0003056,8.06e-12,61;UBERON:0001017,1.93e-11,81;UBERON:0004121,6.58e-11,171;UBERON:0000924,6.58e-11,171;UBERON:0006601,6.58e-11,171;UBERON:0001893,1.84e-10,34;UBERON:0000955,2.94e-10,68;UBERON:0006238,2.94e-10,68;UBERON:0002791,2.48e-09,32;UBERON:0003528,1.15e-08,34;UBERON:0002020,1.15e-08,34;UBERON:0000956,4.15e-08,25;UBERON:0000203,4.15e-08,25;UBERON:0001869,1.39e-07,32;UBERON:0005162,1.76e-07,2;UBERON:0000122,1.76e-07,2;UBERON:0004111,4.82e-07,240 | |||
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| ||
|short_description=p5@FRYL | |||
}} | }} |
Latest revision as of 23:02, 17 September 2015
Short description: | p5@FRYL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FRYL_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000507711_5end |
EntrezGene: | FRYL |
HGNC: | 29127 |
UniProt: | F2Z2S2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 5.33e-16 | 104 |
neurectoderm | 6.27e-16 | 86 |
neural plate | 1.81e-15 | 82 |
presumptive neural plate | 1.81e-15 | 82 |
neural tube | 2.26e-15 | 56 |
neural rod | 2.26e-15 | 56 |
future spinal cord | 2.26e-15 | 56 |
neural keel | 2.26e-15 | 56 |
regional part of forebrain | 1.90e-13 | 41 |
forebrain | 1.90e-13 | 41 |
anterior neural tube | 1.90e-13 | 41 |
future forebrain | 1.90e-13 | 41 |
regional part of nervous system | 7.92e-13 | 53 |
regional part of brain | 7.92e-13 | 53 |
structure with developmental contribution from neural crest | 2.94e-12 | 132 |
nervous system | 3.75e-12 | 89 |
pre-chordal neural plate | 8.06e-12 | 61 |
central nervous system | 1.93e-11 | 81 |
ectoderm-derived structure | 6.58e-11 | 171 |
ectoderm | 6.58e-11 | 171 |
presumptive ectoderm | 6.58e-11 | 171 |
telencephalon | 1.84e-10 | 34 |
brain | 2.94e-10 | 68 |
future brain | 2.94e-10 | 68 |
regional part of telencephalon | 2.48e-09 | 32 |
brain grey matter | 1.15e-08 | 34 |
gray matter | 1.15e-08 | 34 |
cerebral cortex | 4.15e-08 | 25 |
pallium | 4.15e-08 | 25 |
cerebral hemisphere | 1.39e-07 | 32 |
multi cell component structure | 1.76e-07 | 2 |
neuron projection bundle | 1.76e-07 | 2 |
anatomical conduit | 4.82e-07 | 240 |