FFCP PHASE1:Hg19::chr9:133710206..133710227,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25 | |EntrezGene=25 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=76 | |HGNC=76 | ||
|TSSclassifier=strong | |||
|UniProt=P00519 | |UniProt=P00519 | ||
|association_with_transcript=-225bp_to_ENST00000318560_5end | |association_with_transcript=-225bp_to_ENST00000318560_5end | ||
|cluster_id=chr9:133710206..133710227,+ | |||
|description=CAGE_peak_3_at_ABL1_5end | |description=CAGE_peak_3_at_ABL1_5end | ||
|id=chr9:133710206..133710227,+ | |id=chr9:133710206..133710227,+ | ||
Latest revision as of 01:16, 16 September 2015
| Short description: | p3@ABL1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_ABL1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -225bp_to_ENST00000318560_5end |
| EntrezGene: | ABL1 |
| HGNC: | 76 |
| UniProt: | P00519 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@ABL1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| vascular associated smooth muscle cell | 1.01e-17 | 32 |
| multi fate stem cell | 2.33e-17 | 427 |
| stem cell | 4.51e-17 | 441 |
| somatic stem cell | 1.13e-16 | 433 |
| mesodermal cell | 6.36e-13 | 121 |
| endothelial cell of artery | 8.10e-13 | 9 |
| endothelial cell of vascular tree | 1.04e-11 | 24 |
| smooth muscle cell | 2.21e-11 | 43 |
| smooth muscle myoblast | 2.21e-11 | 43 |
| endothelial cell | 2.06e-10 | 36 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| artery | 7.85e-29 | 42 |
| arterial blood vessel | 7.85e-29 | 42 |
| arterial system | 7.85e-29 | 42 |
| vessel | 8.76e-24 | 68 |
| epithelial tube open at both ends | 2.87e-23 | 59 |
| blood vessel | 2.87e-23 | 59 |
| blood vasculature | 2.87e-23 | 59 |
| vascular cord | 2.87e-23 | 59 |
| vasculature | 2.51e-21 | 78 |
| vascular system | 2.51e-21 | 78 |
Showing 1 to 10 of 50 entries
