FFCP PHASE1:Hg19::chr4:4544047..4544060,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:4544047..4544060,-
|short_description=p3@STX18
|description=CAGE_peak_3_at_STX18_5end
|association_with_transcript=12bp_to_ENST00000507908_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=53407 | |EntrezGene=53407 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15942 | |HGNC=15942 | ||
|TSSclassifier=strong | |||
|UniProt=D6RC71 | |UniProt=D6RC71 | ||
|association_with_transcript=12bp_to_ENST00000507908_5end | |||
|cluster_id=chr4:4544047..4544060,- | |||
|coexpression_cluster_id=C136 | |||
|description=CAGE_peak_3_at_STX18_5end | |||
|id=chr4:4544047..4544060,- | |||
|ontology_enrichment_celltype=CL:0002057!7.69e-25!42;CL:0000860!1.44e-22!45;CL:0002009!3.30e-22!65;CL:0002194!1.34e-21!63;CL:0000576!1.34e-21!63;CL:0000040!1.34e-21!63;CL:0000559!1.34e-21!63;CL:0000557!5.30e-21!71;CL:0000839!6.03e-20!70;CL:0000766!1.55e-17!76;CL:0002031!1.14e-12!124;CL:0002087!1.18e-12!119;CL:0000738!1.26e-10!140;CL:0000763!2.93e-10!112;CL:0000049!2.93e-10!112;CL:0002032!2.56e-07!165;CL:0000837!2.56e-07!165;CL:0000037!3.98e-07!172;CL:0000566!3.98e-07!172;CL:0000988!4.54e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.86e-15;33!CL:0002057;6.86e-15;33!CL:0000473;3.49e-12;39!CL:0000234;3.49e-12;39!CL:0000766;5.95e-09;69!CL:0000576;8.21e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.18e-12,42;CL:0002057,6.18e-12,42;CL:0000839,1.35e-10,66;CL:0000473,1.85e-10,48;CL:0000234,1.85e-10,48;CL:0000557,1.94e-10,67;CL:0000766,1.02e-09,72;CL:0002194,2.20e-08,59;CL:0000576,2.20e-08,59;CL:0000040,2.20e-08,59;CL:0000559,2.20e-08,59;CL:0002009,4.09e-08,61;CL:0002031,9.13e-08,120;CL:0000738,8.11e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;2.65e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.06e-17!80;UBERON:0001474!1.88e-15!86;UBERON:0002390!5.34e-14!102;UBERON:0003061!5.34e-14!102;UBERON:0004765!1.85e-13!101;UBERON:0001434!1.85e-13!101;UBERON:0002405!9.23e-13!115;UBERON:0002193!1.64e-12!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.32e-09,76;UBERON:0001474,1.57e-08,82;UBERON:0004765,9.11e-08,90;UBERON:0002405,1.63e-07,93;UBERON:0002390,3.99e-07,98;UBERON:0003061,3.99e-07,98;UBERON:0001434,5.57e-07,100 | |||
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| ||
|short_description=p3@STX18 | |||
}} | }} |
Latest revision as of 21:18, 17 September 2015
Short description: | p3@STX18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STX18_5end |
Coexpression cluster: | C136_Wilms_extraskeletal_anaplastic_rhabdomyosarcoma_cholangiocellular_nonsmall_neuroectodermal |
Association with transcript: | 12bp_to_ENST00000507908_5end |
EntrezGene: | STX18 |
HGNC: | 15942 |
UniProt: | D6RC71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.18e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.18e-12 | 42 |
myeloid lineage restricted progenitor cell | 1.35e-10 | 66 |
defensive cell | 1.85e-10 | 48 |
phagocyte | 1.85e-10 | 48 |
granulocyte monocyte progenitor cell | 1.94e-10 | 67 |
myeloid leukocyte | 1.02e-09 | 72 |
monopoietic cell | 2.20e-08 | 59 |
monocyte | 2.20e-08 | 59 |
monoblast | 2.20e-08 | 59 |
promonocyte | 2.20e-08 | 59 |
macrophage dendritic cell progenitor | 4.09e-08 | 61 |
hematopoietic lineage restricted progenitor cell | 9.13e-08 | 120 |
leukocyte | 8.11e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.32e-09 | 76 |
bone element | 1.57e-08 | 82 |
skeletal element | 9.11e-08 | 90 |
immune system | 1.63e-07 | 93 |
hematopoietic system | 3.99e-07 | 98 |
blood island | 3.99e-07 | 98 |
skeletal system | 5.57e-07 | 100 |