FFCP PHASE1:Hg19::chr12:21680057..21680084,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80763 | |EntrezGene=80763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28139 | |HGNC=28139 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXE5 | |UniProt=F5GXE5 | ||
|association_with_transcript=0bp_to_ENST00000546199_5end | |association_with_transcript=0bp_to_ENST00000546199_5end | ||
|cluster_id=chr12:21680057..21680084,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_8_at_C12orf39_5end | |description=CAGE_peak_8_at_C12orf39_5end |
Latest revision as of 19:46, 17 September 2015
Short description: | p8@C12orf39 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_C12orf39_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000546199_5end |
EntrezGene: | C12orf39 |
HGNC: | 28139 |
UniProt: | F5GXE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p8@C12orf39 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 7.99e-62 | 56 |
neural rod | 7.99e-62 | 56 |
future spinal cord | 7.99e-62 | 56 |
neural keel | 7.99e-62 | 56 |
regional part of nervous system | 2.18e-52 | 53 |
regional part of brain | 2.18e-52 | 53 |
central nervous system | 2.22e-46 | 81 |
neural plate | 2.94e-46 | 82 |
presumptive neural plate | 2.94e-46 | 82 |
regional part of forebrain | 1.13e-44 | 41 |
Showing 1 to 10 of 81 entries