FFCP PHASE1:Hg19::chr4:39034053..39034064,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:39034053..39034064,-
|short_description=p3@TMEM156
|description=CAGE_peak_3_at_TMEM156_5end
|association_with_transcript=-12bp_to_ENST00000381938,NM_024943...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80008 | |EntrezGene=80008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26260 | |HGNC=26260 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N614 | |UniProt=Q8N614 | ||
|association_with_transcript=-12bp_to_ENST00000381938,NM_024943,uc003gto.2,uc010ifj.2_5end | |||
|cluster_id=chr4:39034053..39034064,- | |||
|coexpression_cluster_id=C4409 | |||
|description=CAGE_peak_3_at_TMEM156_5end | |||
|id=chr4:39034053..39034064,- | |||
|ontology_enrichment_celltype=CL:0000945!6.10e-20!24;CL:0000826!6.10e-20!24;CL:0000542!2.18e-17!53;CL:0000051!2.18e-17!53;CL:0000838!1.03e-16!52;CL:0000236!1.35e-11!14 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.18e-33;13!CL:0000945;1.20e-24;24!CL:0000542;6.05e-13;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.05e-31,14;CL:0000945,5.37e-25,24;CL:0000826,5.37e-25,24;CL:0000838,2.72e-16,52;CL:0000542,6.37e-16,53;CL:0000051,6.37e-16,53 | |||
|ontology_enrichment_development_v019=CL:0000051;6.05e-13;53!UBERON:0009847;2.67e-07;3!UBERON:0003353;2.67e-07;3!UBERON:0001041;5.89e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,4.49e-07,82 | |||
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| ||
|short_description=p3@TMEM156 | |||
}} | }} |
Latest revision as of 16:32, 17 September 2015
Short description: | p3@TMEM156 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM156_5end |
Coexpression cluster: | C4409_bronchioalveolar_CD19_large_malignant_prostate_gall_meningioma |
Association with transcript: | -12bp_to_ENST00000381938, NM_024943, uc003gto.2, uc010ifj.2_5end |
EntrezGene: | TMEM156 |
HGNC: | 26260 |
UniProt: | Q8N614 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.05e-31 | 14 |
lymphocyte of B lineage | 5.37e-25 | 24 |
pro-B cell | 5.37e-25 | 24 |
lymphoid lineage restricted progenitor cell | 2.72e-16 | 52 |
lymphocyte | 6.37e-16 | 53 |
common lymphoid progenitor | 6.37e-16 | 53 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 4.49e-07 | 82 |