FFCP PHASE1:Hg19::chr4:331578..331615,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:331578..331615,+
|short_description=p1@ZNF141
|description=CAGE_peak_1_at_ZNF141_5end
|association_with_transcript=0bp_to_ENST00000366506,ENST00000512994,N...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7700 | |EntrezGene=7700 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12926 | |HGNC=12926 | ||
|TSSclassifier=strong | |||
|UniProt=D6RIY0,Q15928 | |UniProt=D6RIY0,Q15928 | ||
|association_with_transcript=0bp_to_ENST00000366506,ENST00000512994,NM_003441,uc003fzz.2,uc003gaa.2,uc003gab.2_5end | |||
|cluster_id=chr4:331578..331615,+ | |||
|coexpression_cluster_id=C1815 | |||
|description=CAGE_peak_1_at_ZNF141_5end | |||
|id=chr4:331578..331615,+ | |||
|ontology_enrichment_celltype=CL:0000037!9.05e-08!172;CL:0000566!9.05e-08!172;CL:0000738!1.18e-07!140;CL:0002031!1.78e-07!124;CL:0002032!1.91e-07!165;CL:0000837!1.91e-07!165;CL:0000838!7.21e-07!52;CL:0000988!7.99e-07!182 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.61e-09,168;CL:0000738,5.97e-09,136;CL:0002031,7.92e-09,120;CL:0002032,1.22e-08,161;CL:0000837,1.22e-08,161;CL:0000988,3.69e-08,177;CL:0002087,4.89e-07,115;CL:0000838,7.62e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.44e-28!115;UBERON:0000073!1.99e-15!94;UBERON:0001016!1.99e-15!94;UBERON:0001049!9.91e-15!57;UBERON:0005068!9.91e-15!57;UBERON:0006241!9.91e-15!57;UBERON:0007135!9.91e-15!57;UBERON:0001017!6.17e-14!82;UBERON:0005743!8.87e-14!86;UBERON:0002780!1.90e-12!41;UBERON:0001890!1.90e-12!41;UBERON:0006240!1.90e-12!41;UBERON:0003080!3.06e-12!42;UBERON:0002616!6.90e-12!59;UBERON:0002346!8.49e-11!90;UBERON:0000955!2.21e-10!69;UBERON:0006238!2.21e-10!69;UBERON:0003075!3.46e-10!86;UBERON:0007284!3.46e-10!86;UBERON:0002020!8.02e-10!34;UBERON:0003528!8.02e-10!34;UBERON:0002791!2.31e-09!33;UBERON:0001893!2.51e-09!34;UBERON:0001869!8.34e-09!32;UBERON:0003056!8.53e-08!61;UBERON:0000956!6.98e-07!25;UBERON:0000203!6.98e-07!25;UBERON:0002619!7.30e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.53e-09;41!UBERON:0001890;1.53e-09;41!UBERON:0002791;9.13e-09;32!UBERON:0003528;1.23e-08;34!UBERON:0002020;1.23e-08;34!UBERON:0000073;1.80e-08;53!UBERON:0002616;1.80e-08;53!UBERON:0001869;2.51e-08;32!UBERON:0001893;3.70e-08;34!UBERON:0007023;4.94e-08;114!UBERON:0000922;2.03e-07;49!UBERON:0000956;6.00e-07;25!UBERON:0000203;6.00e-07;25!UBERON:0002619;6.34e-07;22!UBERON:0001016;9.31e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.75e-28,114;UBERON:0001016,1.10e-15,89;UBERON:0001049,6.48e-15,56;UBERON:0005068,6.48e-15,56;UBERON:0006241,6.48e-15,56;UBERON:0007135,6.48e-15,56;UBERON:0001017,4.90e-14,81;UBERON:0000073,1.03e-13,53;UBERON:0002616,1.03e-13,53;UBERON:0002780,1.89e-12,41;UBERON:0001890,1.89e-12,41;UBERON:0003080,1.89e-12,41;UBERON:0006240,1.89e-12,41;UBERON:0002346,3.76e-11,86;UBERON:0003075,1.55e-10,82;UBERON:0007284,1.55e-10,82;UBERON:0000955,1.82e-10,68;UBERON:0006238,1.82e-10,68;UBERON:0003528,7.99e-10,34;UBERON:0002020,7.99e-10,34;UBERON:0001893,2.51e-09,34;UBERON:0002791,2.62e-09,32;UBERON:0001869,8.31e-09,32;UBERON:0003056,3.26e-08,61;UBERON:0000956,6.96e-07,25;UBERON:0000203,6.96e-07,25;UBERON:0002619,7.28e-07,22 | |||
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| ||
|short_description=p1@ZNF141 | |||
}} | }} |
Latest revision as of 13:47, 17 September 2015
Short description: | p1@ZNF141 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF141_5end |
Coexpression cluster: | C1815_CD4_cerebellum_cord_CD19_pineal_parietal_pituitary |
Association with transcript: | 0bp_to_ENST00000366506, ENST00000512994, NM_003441, uc003fzz.2, uc003gaa.2, uc003gab.2_5end |
EntrezGene: | ZNF141 |
HGNC: | 12926 |
UniProt: | D6RIY0Q15928 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.61e-09 | 168 |
leukocyte | 5.97e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 7.92e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.22e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.22e-08 | 161 |
hematopoietic cell | 3.69e-08 | 177 |
nongranular leukocyte | 4.89e-07 | 115 |
lymphoid lineage restricted progenitor cell | 7.62e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.75e-28 | 114 |
nervous system | 1.10e-15 | 89 |
neural tube | 6.48e-15 | 56 |
neural rod | 6.48e-15 | 56 |
future spinal cord | 6.48e-15 | 56 |
neural keel | 6.48e-15 | 56 |
central nervous system | 4.90e-14 | 81 |
regional part of nervous system | 1.03e-13 | 53 |
regional part of brain | 1.03e-13 | 53 |
regional part of forebrain | 1.89e-12 | 41 |
forebrain | 1.89e-12 | 41 |
anterior neural tube | 1.89e-12 | 41 |
future forebrain | 1.89e-12 | 41 |
neurectoderm | 3.76e-11 | 86 |
neural plate | 1.55e-10 | 82 |
presumptive neural plate | 1.55e-10 | 82 |
brain | 1.82e-10 | 68 |
future brain | 1.82e-10 | 68 |
brain grey matter | 7.99e-10 | 34 |
gray matter | 7.99e-10 | 34 |
telencephalon | 2.51e-09 | 34 |
regional part of telencephalon | 2.62e-09 | 32 |
cerebral hemisphere | 8.31e-09 | 32 |
pre-chordal neural plate | 3.26e-08 | 61 |
cerebral cortex | 6.96e-07 | 25 |
pallium | 6.96e-07 | 25 |
regional part of cerebral cortex | 7.28e-07 | 22 |