FFCP PHASE1:Hg19::chr4:169552605..169552617,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:169552605..169552617,+
|short_description=p16@PALLD
|description=CAGE_peak_16_at_PALLD_5end
|association_with_transcript=-148bp_to_ENST00000504519_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23022 | |EntrezGene=23022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17068 | |HGNC=17068 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBH5 | |UniProt=D6RBH5 | ||
|association_with_transcript=-148bp_to_ENST00000504519_5end | |||
|cluster_id=chr4:169552605..169552617,+ | |||
|coexpression_cluster_id=C947 | |||
|description=CAGE_peak_16_at_PALLD_5end | |||
|id=chr4:169552605..169552617,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.25e-11!180;CL:0000128!4.07e-07!7;CL:0000126!4.07e-07!7;CL:0000127!4.07e-07!7;CL:0002453!4.07e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;5.55e-16;7!CL:0000126;5.55e-16;7!CL:0000127;5.55e-16;7!CL:0000243;2.29e-09;15!CL:0000125;2.29e-09;15!CL:0000062;1.00e-08;9!CL:0002580;2.48e-08;3!CL:0000064;2.63e-08;3!CL:0000067;2.63e-08;3!CL:0005012;2.63e-08;3!CL:0002304;2.63e-08;3!CL:0000095;3.47e-08;17!CL:0002605;4.12e-08;3!CL:0000515;5.03e-08;3!CL:0002590;6.42e-08;3!CL:0002603;7.73e-08;3!CL:0000622;1.68e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.96e-16,7;CL:0000126,3.96e-16,7;CL:0000127,3.96e-16,7;CL:0002453,3.96e-16,7;CL:0000243,1.49e-09,15;CL:0000125,1.49e-09,15;CL:0000030,1.49e-09,15;CL:0000339,1.49e-09,15;CL:0000062,1.59e-09,11;CL:0000375,1.59e-09,11;CL:0000335,1.59e-09,11;CL:0000221,1.94e-08,72;CL:0000064,2.23e-08,3;CL:0000067,2.23e-08,3;CL:0005012,2.23e-08,3;CL:0002304,2.23e-08,3;CL:0002580,2.34e-08,3;CL:0000095,2.37e-08,17;CL:0000123,2.37e-08,17;CL:0002605,4.53e-08,3;CL:0002590,6.27e-08,3;CL:0002603,8.47e-08,3;CL:0000622,2.36e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000335;1.89e-09;11!CL:0000339;2.29e-09;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.11e-09!365;UBERON:0000468!6.70e-08!659;UBERON:0002200!2.85e-07!11;UBERON:0006876!2.85e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;6.35e-13;11!UBERON:0005284;8.58e-12;5!UBERON:0001778;2.63e-08;3!UBERON:0001775;2.63e-08;3!UBERON:0000075;1.22e-07;16!UBERON:0004765;3.77e-07;26!UBERON:0011137;6.60e-07;11!UBERON:0010323;6.60e-07;11!UBERON:0001434;6.72e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,4.36e-13,11;UBERON:0005284,5.94e-12,5;UBERON:0011137,7.85e-09,14;UBERON:0001778,2.23e-08,3;UBERON:0001775,2.23e-08,3;UBERON:0000075,1.51e-07,16;UBERON:0010323,6.70e-07,11 | |||
|phase1_expression=3.08853244759946,1.92690471501885,0.704772020479856,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0.491467873003018,0,1.09220686065086,0.527533956456907,0.123766352960047,0.331397375727916,0.672325146451775,1.20538905604795,0.730310090387373,1.46379839637152,1.23121058076788,3.26401105990805,5.64218498660558,2.0036519099174,3.69560947696787,4.3939923858181,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,0.144846518960824,0,0.486634870302636,4.72674085820339,3.32594096193846,4.83091321312193,0.327447688744282,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,1.53316637465883,0,0,0,0,0.436094052142534,0.993943903390637,1.64619665163954,0.926864265692532,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,1.97334038733728,0,0.269421344139376,0,1.51357427644931,3.45705554687999,0,0,0,0,0,0,0,0,0,0,0,1.48360157567134,0,0,0,0,0,1.31693286264251,2.45190236639216,1.65261864797256,0.340296549480063,0.717558542755448,0.427114777637135,0,0.300091096084402,0.103052529238439,0.257640540045629,1.11670113798954,0.337552664482532,0.194874010322397,1.51460264546469,0.828449087780694,0,0,0.10075209822764,0.339121184620975,0.773043412653187,1.36373060295417,0.573609190778008,0.243947412259191,0.397589304964456,0.116193942869518,0.310983165046111,0.252320850875628,0.72995471815166,0,3.21620469096443,0,0,0.721879481669586,0.591534000199219,1.01150814046861,0.723033089650446,0.55146986366197,0.871517776369625,0.949082476444386,0.943819157121151,0.784885860501384,1.15424147083917,0,0,0,0,0,0,0,0,0,0.514703430895577,1.75600456653801,0,0,0.277765335475589,0,0,0,0.115930404975077,2.46558257895225,0,0,0,0,0,0,0,0,0.93733833986777,4.53551746136921,4.11147782002921,0.53735113621709,0,0,0,0,0.621984346622316,0.432359860250884,0.6312121671319,0,0,0,0,0,0,0,2.35475277125258,0.43596006883328,3.0802080044799,0.517086863031111,0,0.845302752556,0,0,0.771622122786426,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.958499421966331,2.29723871668228,0,5.79125226670317,1.2328579353023,6.80431660311603,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,1.00034104211935,0.542530047399471,0.207970861530807,1.60586089917446,0.788512075169673,1.28855556491985,1.80567659836631,0,1.03473071292505,1.32845119707087,0.921845842708516,0.0868836144680828,0.979005787313703,0.343143423810856,0,0,0,0,0,0.30239029332968,2.72918588600655,10.1284902370121,4.2099014164961,0.128139149255701,2.55853624533352,1.12597744800525,0,1.07946785661859,0.355123450626254,0.492762936082855,0.519254429183621,0.348631135379878,0,0.601519410909855,0,0,0.182091168006717,0.262248829918848,0.451199612907412,0.0770153371044148,1.56869953835371,0,0.633309773357254,0,0,1.0795795805107,0,0.812839312631559,0.501689773854853,0,0,0.671624264166535,0,0,0,0.328014645699706,0.650756789328606,0,6.3182930724657,5.44562699475881,4.59412430396938,2.60024098414608,0,0.676695028044854,0.462145851343933,0.307007349452259,0.551346289938122,0.429680979473094,1.0151168573996,0.596586391912706,2.93805717634233,0.661139661443912,0.192190067365106,0.382838137483752,0,0,0.31481234683064,0,0,0,0,0,0.286249773483982,5.58237554039501,4.11293252134344,1.33441135746677,0,0,0,0,1.43897966066652,0,0.235624804691373,0.404364963146632,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0,0,0,1.32687795048244,0.438450885253763,0.578775534266688,0,0.608731130888112,0.6196469961995,0.563391205064483,0,0.294747123039363,0,0,0,0.987884678879706,0,0.349934720244983,0.192444225451024,0.670302275535787,0,0,0.86101074534246,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.593929361665277,0,0,0,0,0,0,0.398495976502139,0,0,1.84083628503879,0,0,0.539210106883961,0,0,0.394573622547734,0,5.55684950723184,0,0,0,0.260427761085233,0,0,0,0.254253650292766,0.709163045303809,0,0,0.347249989866585,0,0,0,0,0,0.219385397153973,0,0,2.07765697960252,0,0,0.179515288819544,0,0.638002319463839,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,1.08194319871046,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0,0,0,0.30607276163049,0.31593289814244,0.150323419414493,0.207376382794494,0,0,0,0,0,0,3.12407529003236,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0.870806981601766,0.803982487948041,0.656923656425674,0.0969890164884194,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,1.41416420770077,0,0,1.32597682927218,0.866851769704557,0,0,0,0,0,0,0.229160424011684,0,0.599037001496973,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0.83927341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| ||
|short_description=p16@PALLD | |||
}} | }} |
Latest revision as of 16:35, 16 September 2015
Short description: | p16@PALLD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PALLD_5end |
Coexpression cluster: | C947_bone_Myoblast_mesenchymal_uterus_Preadipocyte_Ciliary_Astrocyte |
Association with transcript: | -148bp_to_ENST00000504519_5end |
EntrezGene: | PALLD |
HGNC: | 17068 |
UniProt: | D6RBH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.96e-16 | 7 |
macroglial cell | 3.96e-16 | 7 |
astrocyte | 3.96e-16 | 7 |
oligodendrocyte precursor cell | 3.96e-16 | 7 |
glial cell (sensu Vertebrata) | 1.49e-09 | 15 |
glial cell | 1.49e-09 | 15 |
glioblast | 1.49e-09 | 15 |
glioblast (sensu Vertebrata) | 1.49e-09 | 15 |
osteoblast | 1.59e-09 | 11 |
osteoprogenitor cell | 1.59e-09 | 11 |
mesenchyme condensation cell | 1.59e-09 | 11 |
ectodermal cell | 1.94e-08 | 72 |
ciliated cell | 2.23e-08 | 3 |
ciliated epithelial cell | 2.23e-08 | 3 |
multi-ciliated epithelial cell | 2.23e-08 | 3 |
non-pigmented ciliary epithelial cell | 2.23e-08 | 3 |
preadipocyte of the breast | 2.34e-08 | 3 |
neuron associated cell | 2.37e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 2.37e-08 | 17 |
astrocyte of the cerebral cortex | 4.53e-08 | 3 |
smooth muscle cell of the brain vasculature | 6.27e-08 | 3 |
astrocyte of the cerebellum | 8.47e-08 | 3 |
acinar cell | 2.36e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 4.36e-13 | 11 |
brain vasculature | 5.94e-12 | 5 |
axial skeletal system | 7.85e-09 | 14 |
ciliary epithelium | 2.23e-08 | 3 |
ciliary body | 2.23e-08 | 3 |
subdivision of skeletal system | 1.51e-07 | 16 |
cranial skeletal system | 6.70e-07 | 11 |