FFCP PHASE1:Hg19::chr4:15719160..15719162,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:15719160..15719162,+
|short_description=p@chr4:15719160..15719162,+
|description=CAGE_peak_at_chr4:15719160..15719162,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:15719160..15719162,+ | |||
|description=CAGE_peak_at_chr4:15719160..15719162,+ | |||
|id=chr4:15719160..15719162,+ | |||
|ontology_enrichment_celltype=CL:0000077!2.40e-17!19;CL:0000222!3.23e-10!119;CL:0000220!1.58e-08!246;CL:0000076!2.06e-08!62;CL:0002321!2.46e-08!248;CL:0000213!5.57e-08!57;CL:0000215!5.57e-08!57 | |||
|ontology_enrichment_celltype_v019=CL:0002262;8.28e-07;2!CL:1000398;8.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,7.20e-07,2;CL:1000398,7.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;9.27e-10;5 | |||
|ontology_enrichment_disease=DOID:193!6.30e-14!29;DOID:2394!6.43e-13!14;DOID:120!4.05e-12!27;DOID:14566!9.14e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.05e-13;14!DOID:3112;2.32e-12;1!DOID:120;3.42e-10;27!DOID:193;1.76e-09;29!DOID:4468;8.28e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.97e-13,14;DOID:3112,1.11e-12,1;DOID:120,3.93e-10,27;DOID:193,2.00e-09,29;DOID:4468,9.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002118!3.33e-09!5;UBERON:0004532!3.33e-09!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;7.02e-13;1!UBERON:0002118;6.36e-10;5!UBERON:0002046;9.27e-10;5!UBERON:0001281;8.28e-07;2!UBERON:0003497;8.28e-07;2!UBERON:0003909;8.28e-07;2!UBERON:0003835;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,7.03e-13,1;UBERON:0002118,5.44e-10,5;UBERON:0002046,6.80e-10,5;UBERON:0004117,6.80e-10,5;UBERON:0007689,6.80e-10,5;UBERON:0007123,6.80e-10,5;UBERON:0003091,6.80e-10,5;UBERON:0001281,7.20e-07,2;UBERON:0003497,7.20e-07,2;UBERON:0003909,7.20e-07,2;UBERON:0003835,7.20e-07,2 | |||
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| ||
|short_description=p@chr4:15719160..15719162,+ | |||
}} | }} |
Latest revision as of 02:40, 30 July 2015
Short description: | p@chr4:15719160..15719162, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:15719160..15719162, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 7.20e-07 | 2 |
endothelial cell of hepatic sinusoid | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 7.03e-13 | 1 |
right ovary | 5.44e-10 | 5 |
thyroid gland | 6.80e-10 | 5 |
pharyngeal pouch | 6.80e-10 | 5 |
thyroid diverticulum | 6.80e-10 | 5 |
pharyngeal pouch 2 | 6.80e-10 | 5 |
thyroid primordium | 6.80e-10 | 5 |
hepatic sinusoid | 7.20e-07 | 2 |
abdomen blood vessel | 7.20e-07 | 2 |
sinusoid | 7.20e-07 | 2 |
abdominal segment blood vessel | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.97e-13 | 14 |
papillary adenocarcinoma | 1.11e-12 | 1 |
female reproductive organ cancer | 3.93e-10 | 27 |
reproductive organ cancer | 2.00e-09 | 29 |
clear cell adenocarcinoma | 9.54e-07 | 2 |