FFCP PHASE1:Hg19::chr4:15683260..15683337,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:15683260..15683337,+
|short_description=p4@FAM200B
|description=CAGE_peak_4_at_FAM200B_5end
|association_with_transcript=0bp_to_ENST00000504823,ENST0000051...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285550 | |EntrezGene=285550 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27740 | |HGNC=27740 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000504823,ENST00000510920_5end | |||
|cluster_id=chr4:15683260..15683337,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_4_at_FAM200B_5end | |||
|id=chr4:15683260..15683337,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.17e-47!172;CL:0000566!7.17e-47!172;CL:0000988!2.35e-45!182;CL:0002032!3.01e-43!165;CL:0000837!3.01e-43!165;CL:0000738!7.40e-42!140;CL:0002087!1.92e-35!119;CL:0002031!7.52e-35!124;CL:0000542!3.41e-28!53;CL:0000051!3.41e-28!53;CL:0000838!1.09e-27!52;CL:0000763!5.67e-17!112;CL:0000049!5.67e-17!112;CL:0000084!1.58e-14!25;CL:0000827!1.58e-14!25;CL:0002057!2.12e-14!42;CL:0000766!2.26e-14!76;CL:0000945!1.04e-12!24;CL:0000826!1.04e-12!24;CL:0000860!2.64e-12!45;CL:0000791!2.74e-12!18;CL:0000789!2.74e-12!18;CL:0002420!2.74e-12!18;CL:0002419!2.74e-12!18;CL:0000790!2.74e-12!18;CL:0000839!1.92e-11!70;CL:0000557!1.06e-09!71;CL:0002194!4.34e-09!63;CL:0000576!4.34e-09!63;CL:0000040!4.34e-09!63;CL:0000559!4.34e-09!63;CL:0000236!1.13e-08!14;CL:0000625!3.33e-08!11;CL:0002009!3.57e-08!65;CL:0000134!1.01e-07!358;CL:0002320!3.54e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.94e-18;53!CL:0000084;3.62e-16;25!CL:0002087;1.70e-14;104!CL:0000945;3.37e-14;24!CL:0000791;8.83e-14;18!CL:0000789;8.83e-14;18!CL:0002419;8.83e-14;18!CL:0000576;3.04e-11;48!CL:0000860;4.70e-11;33!CL:0002057;4.70e-11;33!CL:0000738;1.64e-10;136!CL:0000766;6.52e-10;69!CL:0000988;7.47e-10;177!CL:0000236;2.85e-09;13!CL:0000625;3.80e-09;11!CL:0000763;2.96e-08;100!CL:0000473;7.65e-08;39!CL:0000234;7.65e-08;39!CL:0000094;9.37e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.31e-56,168;CL:0000988,1.08e-54,177;CL:0002032,7.94e-52,161;CL:0000837,7.94e-52,161;CL:0000738,5.14e-50,136;CL:0002087,1.68e-43,115;CL:0002031,5.62e-43,120;CL:0000542,1.27e-31,53;CL:0000051,1.27e-31,53;CL:0000838,4.72e-31,52;CL:0000763,3.64e-21,108;CL:0000049,3.64e-21,108;CL:0000766,1.01e-18,72;CL:0000084,3.45e-16,25;CL:0000827,3.45e-16,25;CL:0000860,4.80e-16,42;CL:0002057,4.80e-16,42;CL:0000839,3.75e-15,66;CL:0000945,3.87e-14,24;CL:0000826,3.87e-14,24;CL:0000473,1.14e-13,48;CL:0000234,1.14e-13,48;CL:0000791,1.16e-13,18;CL:0000789,1.16e-13,18;CL:0002420,1.16e-13,18;CL:0002419,1.16e-13,18;CL:0000790,1.16e-13,18;CL:0000557,4.27e-13,67;CL:0002194,2.77e-12,59;CL:0000576,2.77e-12,59;CL:0000040,2.77e-12,59;CL:0000559,2.77e-12,59;CL:0002009,3.08e-11,61;CL:0000134,2.24e-10,354;CL:0000236,1.39e-09,14;CL:0002320,1.88e-09,361;CL:0000625,4.66e-09,11;CL:0000219,6.21e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000051;1.94e-18;53!CL:0000790;8.83e-14;18!CL:0002057;3.32e-12;42 | |||
|ontology_enrichment_disease=DOID:2531!2.74e-10!51;DOID:0060083!2.74e-10!51;DOID:1240!5.67e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.14e-07;39!DOID:2531;4.54e-07;51!DOID:0060083;4.54e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.50e-12,51;DOID:0060083,9.50e-12,51;DOID:1240,3.55e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.34e-19!102;UBERON:0003061!6.34e-19!102;UBERON:0002193!1.45e-17!112;UBERON:0007023!1.88e-10!115;UBERON:0002371!5.63e-10!80;UBERON:0000178!5.80e-09!15;UBERON:0000179!5.80e-09!15;UBERON:0000463!5.80e-09!15;UBERON:0001474!1.31e-07!86;UBERON:0002405!8.40e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.22e-10;15!UBERON:0000179;6.22e-10;15!UBERON:0000463;6.22e-10;15!UBERON:0002390;8.34e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.75e-24,98;UBERON:0003061,3.75e-24,98;UBERON:0002193,2.09e-21,108;UBERON:0002405,2.85e-14,93;UBERON:0002371,2.41e-13,76;UBERON:0001474,1.15e-10,82;UBERON:0000178,6.52e-10,15;UBERON:0000179,6.52e-10,15;UBERON:0000463,6.52e-10,15;UBERON:0007023,1.27e-08,114;UBERON:0004765,2.39e-08,90;UBERON:0002384,2.40e-08,371 | |||
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| ||
|short_description=p4@FAM200B | |||
}} | }} |
Latest revision as of 08:39, 16 September 2015
Short description: | p4@FAM200B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM200B_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000504823, ENST00000510920_5end |
EntrezGene: | FAM200B |
HGNC: | 27740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.75e-24 | 98 |
blood island | 3.75e-24 | 98 |
hemolymphoid system | 2.09e-21 | 108 |
immune system | 2.85e-14 | 93 |
bone marrow | 2.41e-13 | 76 |
bone element | 1.15e-10 | 82 |
blood | 6.52e-10 | 15 |
haemolymphatic fluid | 6.52e-10 | 15 |
organism substance | 6.52e-10 | 15 |
adult organism | 1.27e-08 | 114 |
skeletal element | 2.39e-08 | 90 |
connective tissue | 2.40e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.50e-12 | 51 |
immune system cancer | 9.50e-12 | 51 |
leukemia | 3.55e-09 | 39 |