FFCP PHASE1:Hg19::chr4:15480810..15480819,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:15480810..15480819,+
|short_description=p5@CC2D2A
|description=CAGE_peak_5_at_CC2D2A_5end
|association_with_transcript=-16bp_to_uc003gnx.2_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57545 | |EntrezGene=57545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29253 | |HGNC=29253 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_uc003gnx.2_5end | |||
|cluster_id=chr4:15480810..15480819,+ | |||
|description=CAGE_peak_5_at_CC2D2A_5end | |||
|id=chr4:15480810..15480819,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.25e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.24e-32;2!CL:0002202;1.02e-07;9!CL:0002632;1.02e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.31e-09,8;CL:0002202,1.05e-07,9;CL:0002632,1.05e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.41e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.41e-16;1!DOID:3350;5.93e-09;2!DOID:3910;5.93e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.63e-16,1;DOID:3910,5.08e-09,2;DOID:3350,8.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.07e-12!94;UBERON:0001016!1.07e-12!94;UBERON:0000924!1.35e-12!173;UBERON:0006601!1.35e-12!173;UBERON:0000475!3.19e-12!365;UBERON:0004121!1.66e-11!169;UBERON:0005743!2.84e-11!86;UBERON:0001017!9.93e-11!82;UBERON:0002346!1.07e-10!90;UBERON:0001893!1.92e-10!34;UBERON:0000033!2.81e-10!123;UBERON:0002791!4.53e-10!33;UBERON:0000955!8.59e-10!69;UBERON:0006238!8.59e-10!69;UBERON:0003056!9.06e-10!61;UBERON:0001049!1.07e-09!57;UBERON:0005068!1.07e-09!57;UBERON:0006241!1.07e-09!57;UBERON:0007135!1.07e-09!57;UBERON:0001869!1.45e-09!32;UBERON:0003075!1.63e-09!86;UBERON:0007284!1.63e-09!86;UBERON:0000153!2.19e-09!129;UBERON:0007811!2.19e-09!129;UBERON:0002020!2.86e-09!34;UBERON:0003528!2.86e-09!34;UBERON:0002616!3.87e-09!59;UBERON:0002780!6.54e-09!41;UBERON:0001890!6.54e-09!41;UBERON:0006240!6.54e-09!41;UBERON:0000481!1.80e-08!347;UBERON:0003080!1.97e-08!42;UBERON:0000483!3.40e-08!309;UBERON:0000119!4.10e-08!312;UBERON:0000468!7.93e-08!659;UBERON:0000956!1.69e-07!25;UBERON:0000203!1.69e-07!25;UBERON:0001950!6.25e-07!20;UBERON:0000064!6.33e-07!219;UBERON:0000477!8.24e-07!286;UBERON:0002619!8.56e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002022;1.41e-16;1!UBERON:0001874;1.41e-16;1!UBERON:0000941;1.41e-16;1!UBERON:0001785;1.41e-16;1!UBERON:0002464;1.41e-16;1!UBERON:0004904;1.41e-16;1!UBERON:0001021;1.41e-16;1!UBERON:0004903;5.93e-09;2!UBERON:0003714;5.93e-09;2!UBERON:0005162;5.93e-09;2!UBERON:0000122;5.93e-09;2!UBERON:0002173;5.93e-09;2!UBERON:0002186;5.93e-09;2!UBERON:0004905;1.42e-08;8!UBERON:0000982;1.42e-08;8!UBERON:0004770;1.42e-08;8!UBERON:0002791;8.05e-08;32!UBERON:0001893;2.95e-07;34!UBERON:0001950;3.46e-07;20!UBERON:0001869;3.69e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.21e-16,1;UBERON:0001785,1.21e-16,1;UBERON:0002464,1.21e-16,1;UBERON:0004904,1.21e-16,1;UBERON:0001021,1.21e-16,1;UBERON:0003902,1.21e-16,1;UBERON:0005425,1.21e-16,1;UBERON:0002022,1.41e-16,1;UBERON:0001874,1.93e-16,1;UBERON:0004903,5.08e-09,2;UBERON:0002173,5.08e-09,2;UBERON:0002186,5.08e-09,2;UBERON:0003714,5.49e-09,2;UBERON:0005162,5.49e-09,2;UBERON:0000122,5.49e-09,2;UBERON:0004905,1.78e-08,8;UBERON:0000982,1.78e-08,8;UBERON:0004770,1.78e-08,8;UBERON:0001016,9.46e-08,89;UBERON:0002791,9.61e-08,32;UBERON:0001869,9.61e-08,32;UBERON:0003528,2.59e-07,34;UBERON:0002020,2.59e-07,34;UBERON:0001893,2.59e-07,34;UBERON:0001950,3.21e-07,20;UBERON:0011216,4.16e-07,223 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.563817616383885,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0.655324116390517,0.263766978228454,0.495065411840187,0,0,0,0,0.487932798790507,0.492484232307152,0.204000691244253,0.313454721478088,0.286235987131057,0.684372125364421,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.850813354476611,0.443458794925128,0,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0.872188104285069,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.49333509683432,0.311211035399766,0.404132016209064,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0.485618833104395,0,0,0.61417158655884,0.206651562351531,0,0.494533858557114,0,0.718618141816238,0.336672227908132,0.500474079487857,0,0.438977620880838,0.30648779579902,0.300476117813194,0.680593098960126,0,0,0,0.600182192168805,0.309157587715317,0.772921620136887,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.0920498986422993,0.161646056818812,0.355009592516614,0.201504196455281,0.67824236924195,0.193260853163297,0,0.286804595389004,0.243947412259191,0.265059536642971,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,0.354920400119532,0.337169380156203,0.241011029883482,0.661763836394364,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.439001141634502,0,0.201057944823262,0.370353780634118,0.651616610620649,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0,0.380508304469197,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0,0,0,0.444485260045183,0,0,0,0.411309970813294,0,0.285826432630578,0,0,0.4400297149257,0.258543431515556,0,0.845302752556,0,0,0.514414748524284,0,0.799266537048298,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,1.77866236955724,2.60279707715243,0,0.335032530668698,0.637938751653163,0,0,0,0.49076596687656,1.00034104211935,0,0.831883446123229,0,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0.368738337083406,0.868836144680828,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0,0.128139149255701,0,0.321707842287215,0,0.925258162815933,0.710246901252508,0.739144404124282,0.519254429183621,0.348631135379878,0.241718899183244,0,0,0.574072240823034,0.182091168006717,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.512900250232778,0,0.325378394664303,0.103041011647722,0.640986253728404,0.907604499126468,0,0,0,0.290012154876366,0.308097234229289,0.460511024178389,0.137836572484531,0.214840489736547,0.290033387828457,0.426133137080504,0.534192213880424,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0.143124886741991,0.744316738719335,0,0.38126038784765,0,0.855877976067841,0.318203247925937,0,0.179872457583315,0,0.471249609382746,0.808729926293264,0,0.421258456238981,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0.92947049429925,0.563391205064483,0.143411352204052,0.196498082026242,0.7133421029625,0,0.211107635297664,0,0,0.349934720244983,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0.333926115068718,0,0,0,0,0.251932747854276,0.102268682502155,0,0.311039587661807,0.629078458031288,0.895105873378046,0,0.0986434056369336,0,0,0.969332746095218,0.371072392647405,0,0.520855522170466,0.0874599999961957,0,0,1.5255219017566,0,0,0,0,0.885741385813839,0.361789315876224,0,0.331737779793674,0.591095237907095,0,0.32681539055697,0.278847488557207,0.230850775511391,0.227884111694002,0,0.0897576444097721,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0.649165919226273,0,0,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0,0,1.53036380815245,0.189559738885464,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0.277349346026277,0,0.0979923974143777,0.261177619741208,0.34945333648406,1.0319161948297,0.19351266257817,0.65780385377567,0.574808199372465,0.0969890164884194,0.176512253383001,0,0.822251547880505,0.397429223405979,0.50648636764703,0.195551382734803,0,0,0.599428828746391,0.144090417154106,0.572682980829578,0,0,0,0.471388069233591,0.135904206073614,0.104602846312333,0,0.57790117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| ||
|short_description=p5@CC2D2A | |||
}} | }} |
Latest revision as of 05:42, 16 September 2015
Short description: | p5@CC2D2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CC2D2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_uc003gnx.2_5end |
EntrezGene: | CC2D2A |
HGNC: | 29253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.31e-09 | 8 |
epithelial cell of tracheobronchial tree | 1.05e-07 | 9 |
epithelial cell of lower respiratory tract | 1.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.21e-16 | 1 |
cranial nerve | 1.21e-16 | 1 |
nerve trunk | 1.21e-16 | 1 |
nerve connecting eye with brain | 1.21e-16 | 1 |
nerve | 1.21e-16 | 1 |
retinal neural layer | 1.21e-16 | 1 |
presumptive neural retina | 1.21e-16 | 1 |
insula | 1.41e-16 | 1 |
putamen | 1.93e-16 | 1 |
bronchoalveolar duct junction | 5.08e-09 | 2 |
alveolar duct | 5.08e-09 | 2 |
bronchiole | 5.08e-09 | 2 |
neural tissue | 5.49e-09 | 2 |
multi cell component structure | 5.49e-09 | 2 |
neuron projection bundle | 5.49e-09 | 2 |
articulation | 1.78e-08 | 8 |
skeletal joint | 1.78e-08 | 8 |
articular system | 1.78e-08 | 8 |
nervous system | 9.46e-08 | 89 |
regional part of telencephalon | 9.61e-08 | 32 |
cerebral hemisphere | 9.61e-08 | 32 |
brain grey matter | 2.59e-07 | 34 |
gray matter | 2.59e-07 | 34 |
telencephalon | 2.59e-07 | 34 |
neocortex | 3.21e-07 | 20 |
organ system subdivision | 4.16e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.63e-16 | 1 |
lung adenocarcinoma | 5.08e-09 | 2 |
mesenchymal cell neoplasm | 8.09e-09 | 2 |