FFCP PHASE1:Hg19::chr4:143395591..143395600,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:143395591..143395600,-
|short_description=p16@INPP4B
|description=CAGE_peak_16_at_INPP4B_5end
|association_with_transcript=-30bp_to_ENST00000507861,uc003ii...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8821 | |EntrezGene=8821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6075 | |HGNC=6075 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BS68 | |UniProt=Q9BS68 | ||
|association_with_transcript=-30bp_to_ENST00000507861,uc003iiz.2_5end | |||
|cluster_id=chr4:143395591..143395600,- | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_16_at_INPP4B_5end | |||
|id=chr4:143395591..143395600,- | |||
|ontology_enrichment_celltype=CL:0002076!3.88e-19!43;CL:0000066!7.57e-18!254;CL:0000223!4.69e-14!59;CL:0002251!6.57e-12!21;CL:0002621!1.01e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;3.17e-09;5!CL:0002076;5.95e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.27e-09,5;CL:0002076,1.76e-08,42;CL:0000066,2.58e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.76e-21!106;DOID:1749!4.52e-19!14;DOID:299!5.28e-17!25;DOID:0050687!8.23e-17!143;DOID:5093!1.82e-12!4;DOID:1612!1.82e-12!4;DOID:162!6.00e-08!235;DOID:14566!1.33e-07!239;DOID:7!4.74e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:5093;6.78e-25;4!DOID:1612;6.78e-25;4!DOID:299;3.17e-20;25!DOID:3111;1.07e-11;1!DOID:3603;1.07e-11;1!DOID:7;2.00e-10;39!DOID:1749;2.74e-07;14!DOID:4929;8.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.36e-25,4;DOID:1612,7.36e-25,4;DOID:299,3.46e-20,25;DOID:305,2.04e-17,106;DOID:7,1.01e-12,39;DOID:0050687,2.26e-12,143;DOID:3111,8.64e-12,1;DOID:3603,8.64e-12,1;DOID:1749,3.19e-07,14;DOID:4929,8.93e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.27e-16!169;UBERON:0000925!2.27e-16!169;UBERON:0006595!2.27e-16!169;UBERON:0001007!2.69e-15!155;UBERON:0001555!2.69e-15!155;UBERON:0007026!2.69e-15!155;UBERON:0005911!6.89e-14!82;UBERON:0000161!2.56e-11!35;UBERON:0004921!9.55e-11!129;UBERON:0004185!9.55e-11!129;UBERON:0002294!1.04e-10!7;UBERON:0001173!1.04e-10!7;UBERON:0004912!1.04e-10!7;UBERON:0005153!5.00e-10!37;UBERON:0000077!7.77e-10!130;UBERON:0001949!1.01e-09!3;UBERON:0000162!1.69e-09!14;UBERON:0001353!1.69e-09!14;UBERON:0000163!1.69e-09!14;UBERON:0006866!1.69e-09!14;UBERON:0000164!1.69e-09!14;UBERON:0000931!1.69e-09!14;UBERON:0004122!8.64e-09!15;UBERON:0003929!1.96e-08!54;UBERON:0004807!2.61e-08!28;UBERON:0000344!3.41e-08!12;UBERON:0001004!3.63e-08!72;UBERON:0002394!1.05e-07!4;UBERON:0003928!1.05e-07!4;UBERON:0000915!1.92e-07!52;UBERON:0003343!3.17e-07!4;UBERON:0004785!3.17e-07!4;UBERON:0001255!7.36e-07!2;UBERON:0001556!7.36e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.63e-12;1!UBERON:0003703;2.63e-12;1!UBERON:0001174;2.63e-12;1!UBERON:0004914;2.63e-12;1!UBERON:0002394;8.65e-12;4!UBERON:0003928;8.65e-12;4!UBERON:0000310;2.57e-10;10!UBERON:0000058;3.52e-10;10!UBERON:0001443;2.00e-09;11!UBERON:0002294;4.20e-07;7!UBERON:0001173;4.20e-07;7!UBERON:0000305;7.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.63e-12,1;UBERON:0003703,2.63e-12,1;UBERON:0001174,2.63e-12,1;UBERON:0004914,2.63e-12,1;UBERON:0000310,2.66e-10,10;UBERON:0001443,2.06e-09,11;UBERON:0002394,3.51e-08,6;UBERON:0003928,3.51e-08,6;UBERON:0000305,6.20e-07,7 | |||
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| ||
|short_description=p16@INPP4B | |||
}} | }} |
Latest revision as of 21:05, 15 September 2015
Short description: | p16@INPP4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_INPP4B_5end |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | -30bp_to_ENST00000507861, uc003iiz.2_5end |
EntrezGene: | INPP4B |
HGNC: | 6075 |
UniProt: | Q9BS68 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.27e-09 | 5 |
endo-epithelial cell | 1.76e-08 | 42 |
epithelial cell | 2.58e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.63e-12 | 1 |
extrahepatic bile duct | 2.63e-12 | 1 |
common bile duct | 2.63e-12 | 1 |
duodenal papilla | 2.63e-12 | 1 |
breast | 2.66e-10 | 10 |
chest | 2.06e-09 | 11 |
bile duct | 3.51e-08 | 6 |
digestive system duct | 3.51e-08 | 6 |
amnion | 6.20e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.36e-25 | 4 |
breast cancer | 7.36e-25 | 4 |
adenocarcinoma | 3.46e-20 | 25 |
carcinoma | 2.04e-17 | 106 |
disease of anatomical entity | 1.01e-12 | 39 |
cell type cancer | 2.26e-12 | 143 |
cystadenocarcinoma | 8.64e-12 | 1 |
mucinous cystadenocarcinoma | 8.64e-12 | 1 |
squamous cell carcinoma | 3.19e-07 | 14 |
tubular adenocarcinoma | 8.93e-07 | 2 |