FFCP PHASE1:Hg19::chr4:14113617..14113633,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:14113617..14113633,+
|short_description=p1@ENST00000512754,p1@uc003gnb.2,p1@uc003gnc.2,p1@uc010idt.1
|description=CAGE_peak_1_at_ENST00000512754_5end,CAGE_p...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000512754,uc003gnb.2,uc003gnc.2,uc010idt.1_5end | |||
|cluster_id=chr4:14113617..14113633,+ | |||
|coexpression_cluster_id=C4374 | |||
|description=CAGE_peak_1_at_ENST00000512754_5end,CAGE_peak_1_at_uc003gnb.2_5end,CAGE_peak_1_at_uc003gnc.2_5end,CAGE_peak_1_at_uc010idt.1_5end | |||
|id=chr4:14113617..14113633,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.41e-19!180;CL:0000057!1.29e-18!75;CL:0002620!2.00e-11!23;CL:0000680!3.07e-11!57;CL:0000056!3.07e-11!57;CL:0000355!3.07e-11!57;CL:0000187!2.54e-09!54;CL:0000183!7.24e-08!59;CL:0000393!1.31e-07!60;CL:0000211!1.31e-07!60;CL:0002494!2.84e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.91e-13;23!CL:0000197;5.00e-09;6!CL:0000098;5.00e-09;6!CL:0002167;5.00e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.17e-15,76;CL:0002620,6.70e-13,23;CL:0000197,4.92e-09,6;CL:0000098,4.92e-09,6;CL:0002167,4.92e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.78e-10;3!DOID:127;1.78e-10;3!DOID:0060072;6.15e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.78e-10,3;DOID:127,1.78e-10,3;DOID:0060072,6.17e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001134!6.69e-10!61;UBERON:0002036!6.69e-10!61;UBERON:0003082!6.69e-10!61;UBERON:0002385!2.65e-09!63;UBERON:0001015!2.65e-09!63;UBERON:0000383!2.65e-09!63;UBERON:0000914!9.94e-09!83;UBERON:0002329!9.94e-09!83;UBERON:0003077!9.94e-09!83;UBERON:0003059!9.94e-09!83;UBERON:0007282!9.94e-09!83;UBERON:0009618!9.94e-09!83;UBERON:0007285!9.94e-09!83;UBERON:0001737!2.62e-08!9;UBERON:0004290!4.10e-08!70;UBERON:0002199!7.67e-08!45;UBERON:0002416!7.67e-08!45;UBERON:0003102!5.70e-07!95;UBERON:0000486!7.65e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,6.45e-09,46;UBERON:0002416,6.45e-09,46 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,1.0007329835313,0,0,2.53299878168311,1.26343974685366,0.261185628199839,0,0,0,0,0,0.331397375727916,0,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0.496971951695318,4.43206790826029,4.50191214764944,0,0,0.560677600142307,0,0,4.35695449559673,0.942974704487816,0.490385709340376,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0.408308342509787,0,0,0,1.23633464639278,0.910161361938026,0.718618141816238,0,0.125118519871964,0,2.63386572528503,1.83892677479412,1.50238058906597,0.907457465280168,0.538168907066586,1.92201649936711,1.90738711043606,0,0.515262646192195,2.06112432036503,4.65292140828975,0.337552664482532,0.292311015483596,1.51460264546469,1.47279837827679,1.13152239773168,1.06502877754984,1.71278566986988,5.93462073086707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.337169380156203,0.723033089650446,0.220587945464788,0.217879444092406,0.237270619111097,0.404493924480493,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0.290633938513962,0,0,0,0,0.576479813667846,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,7.44626726437637,7.28052058379563,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,3.76431397335706,1.2328579353023,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,6.86303843051664,14.9880350589616,11.8276811275451,16.5169395139726,0,0,0,0,0,3.0409265063829,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0,0,0.308419387605311,1.06537035187876,2.46381468041427,0,0.697262270759755,0,0.200506470303285,0,0.229628896329213,2.00300284807389,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.429680979473094,0.435050081742686,0.340906509664404,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,0.286249773483982,0.372158369359667,0.316379424718726,0.38126038784765,0.255897791311334,0,0.95460974377781,0,0.539617372749944,0,1.29593642580255,0.606547444719948,1.58510321173008,0,0,1.21856744815642,0,3.41249778519964,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0.563391205064483,0.430234056612155,0.589494246078727,0,13.1261593706121,0,1.64647446479951,1.13841952129715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.6775358607475,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75550132947635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0.126373159256976,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.17472666824203,0,0,0,0,0,0,0,1.50746117111426,0.19871461170299,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,1.22397861163586,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0,0.105600336519406,0,0,0,0,0,7.60199442455198,12.963322368019,6.20515984207877,0,0,17.2091902003276,0.226624183040251,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0.372578417648301,0,0,0,0,0,0,0,1.04478362020812,0,2.21922344601045,1.51522404220071,1.76097531226803,0.889811221596536,3.43260102595385,8.31770080697815,0,0.443565449968902,0,0,0,0.829412415681711,0,0,0,0,0,0,0,0,0,2.40016658797892,0.343395705182793,0,2.52369796457302,0.57785949122191,0,0,0,0,0,21.4906609297785,0,0,1.76689145945881,0,9.79866155787821,0,2.07258205038719,0,0,0,0,0,0,0.245772908753719,0,0,0,0,6.2426754892352,0.184105950251841,0,0,0,0,0,0.109209638192014,0.33946505990805,0,0.123935764259002,0,2.54403480522735,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,5.73201711285339,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.556157009460346,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,1.35941691750254,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,1.73050624849516,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.448527450322454,0.12729431655633,0.202117188958219,0,0,0,0,0,0,0.106727345877715,1.9307228228694,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0.181678379270557,0.428201047781966,0,1.0007329835313,0,0,2.53299878168311,1.26343974685366,0.261185628199839,0,0,0,0,0,0.331397375727916,0,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0.496971951695318,4.43206790826029,4.50191214764944,0,0,0.560677600142307,0,0,4.35695449559673,0.942974704487816,0.490385709340376,0.151357427644931,0,0,0,0,0,0,0,0.140450806702248,0.408308342509787,0,0,0,1.23633464639278,0.910161361938026,0.718618141816238,0,0.125118519871964,0,2.63386572528503,1.83892677479412,1.50238058906597,0.907457465280168,0.538168907066586,1.92201649936711,1.90738711043606,0,0.515262646192195,2.06112432036503,4.65292140828975,0.337552664482532,0.292311015483596,1.51460264546469,1.47279837827679,1.13152239773168,1.06502877754984,1.71278566986988,5.93462073086707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.337169380156203,0.723033089650446,0.220587945464788,0.217879444092406,0.237270619111097,0.404493924480493,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0.290633938513962,0,0,0,0,0.576479813667846,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,7.44626726437637,7.28052058379563,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,3.76431397335706,1.2328579353023,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,6.86303843051664,14.9880350589616,11.8276811275451,16.5169395139726,0,0,0,0,0,3.0409265063829,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0,0,0.308419387605311,1.06537035187876,2.46381468041427,0,0.697262270759755,0,0.200506470303285,0,0.229628896329213,2.00300284807389,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0.429680979473094,0.435050081742686,0.340906509664404,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,0.286249773483982,0.372158369359667,0.316379424718726,0.38126038784765,0.255897791311334,0,0.95460974377781,0,0.539617372749944,0,1.29593642580255,0.606547444719948,1.58510321173008,0,0,1.21856744815642,0,3.41249778519964,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0.563391205064483,0.430234056612155,0.589494246078727,0,13.1261593706121,0,1.64647446479951,1.13841952129715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,46.6775358607475,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75550132947635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0.126373159256976,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.17472666824203,0,0,0,0,0,0,0,1.50746117111426,0.19871461170299,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,1.22397861163586,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0,0.105600336519406,0,0,0,0,0,7.60199442455198,12.963322368019,6.20515984207877,0,0,17.2091902003276,0.226624183040251,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0.372578417648301,0,0,0,0,0,0,0,1.04478362020812,0,2.21922344601045,1.51522404220071,1.76097531226803,0.889811221596536,3.43260102595385,8.31770080697815,0,0.443565449968902,0,0,0,0.829412415681711,0,0,0,0,0,0,0,0,0,2.40016658797892,0.343395705182793,0,2.52369796457302,0.57785949122191,0,0,0,0,0,21.4906609297785,0,0,1.76689145945881,0,9.79866155787821,0,2.07258205038719,0,0,0,0,0,0,0.245772908753719,0,0,0,0,6.2426754892352,0.184105950251841,0,0,0,0,0,0.109209638192014,0.33946505990805,0,0.123935764259002,0,2.54403480522735,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,5.73201711285339,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0.556157009460346,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,1.35941691750254,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,1.73050624849516,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.448527450322454,0.12729431655633,0.202117188958219,0,0,0,0,0,0,0.106727345877715,1.9307228228694,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p1@ENST00000512754,p1@uc003gnb.2,p1@uc003gnc.2,p1@uc010idt.1 | |||
}} | }} |
Latest revision as of 01:49, 30 July 2015
Short description: | p1@ENST00000512754, p1@uc003gnb.2, p1@uc003gnc.2, p1@uc010idt.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000512754_5end, CAGE_peak_1_at_uc003gnb.2_5end, CAGE_peak_1_at_uc003gnc.2_5end, CAGE_peak_1_at_uc010idt.1_5end |
Coexpression cluster: | C4374_bone_mesothelioma_Olfactory_liposarcoma_leiomyoma_Smooth_mesenchymal |
Association with transcript: | 3bp_to_ENST00000512754, uc003gnb.2, uc003gnc.2, uc010idt.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.17e-15 | 76 |
skin fibroblast | 6.70e-13 | 23 |
receptor cell | 4.92e-09 | 6 |
sensory epithelial cell | 4.92e-09 | 6 |
olfactory epithelial cell | 4.92e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
integument | 6.45e-09 | 46 |
integumental system | 6.45e-09 | 46 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.78e-10 | 3 |
leiomyoma | 1.78e-10 | 3 |
benign neoplasm | 6.17e-08 | 4 |