FFCP PHASE1:Hg19::chr4:125563283..125563289,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:125563283..125563289,-
|short_description=p@chr4:125563283..125563289,-
|description=CAGE_peak_at_chr4:125563283..125563289,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:125563283..125563289,- | |||
|description=CAGE_peak_at_chr4:125563283..125563289,- | |||
|id=chr4:125563283..125563289,- | |||
|ontology_enrichment_celltype=CL:0000066!7.37e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0000342;6.42e-13;1!CL:0002565;6.42e-13;1!CL:0000319;6.42e-13;1!CL:0000306;1.56e-12;4!CL:0002222;1.56e-12;4!CL:0002224;1.56e-12;4!CL:0000159;4.29e-07;2!CL:0002097;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,5.38e-13,1;CL:0000342,6.06e-13,1;CL:0002565,6.06e-13,1;CL:0000306,1.23e-12,4;CL:0002222,1.23e-12,4;CL:0002224,1.23e-12,4;CL:0000066,1.67e-08,253;CL:0000159,3.93e-07,2;CL:0002097,4.69e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.30e-10!106;DOID:0050687!5.82e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3030;6.42e-13;1!DOID:5662;6.42e-13;1!DOID:3910;2.35e-07;2!DOID:4468;4.29e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,5.38e-13,1;DOID:5662,9.73e-13,1;DOID:305,5.32e-12,106;DOID:0050687,2.94e-10,143;DOID:3910,2.28e-07,2;DOID:4468,4.98e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!3.35e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002506;6.42e-13;1!UBERON:0001769;6.42e-13;1!UBERON:0010077;1.56e-12;4!UBERON:0005389;1.56e-12;4!UBERON:0000484;1.56e-12;4!UBERON:0000965;1.56e-12;4!UBERON:0001803;1.56e-12;4!UBERON:0007625;4.64e-10;11!UBERON:0001801;5.12e-08;14!UBERON:0004903;2.35e-07;2!UBERON:0002173;2.35e-07;2!UBERON:0002186;2.35e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002506,6.06e-13,1;UBERON:0001769,6.06e-13,1;UBERON:0010077,1.23e-12,4;UBERON:0005389,1.23e-12,4;UBERON:0000484,1.23e-12,4;UBERON:0002546,1.23e-12,4;UBERON:0000965,1.23e-12,4;UBERON:0001803,1.23e-12,4;UBERON:0003073,1.23e-12,4;UBERON:0005426,1.23e-12,4;UBERON:0007625,4.03e-10,11;UBERON:0001801,4.59e-08,14;UBERON:0004903,2.28e-07,2;UBERON:0002173,2.28e-07,2;UBERON:0002186,2.28e-07,2;UBERON:0000076,9.38e-07,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.768482119587302,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.398927315243264,0,0,0,0,1.00499466102697,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775250277507987,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22617410045812,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0.260427761085233,0,0,0,3.55955110409873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,1.2557316736289,0,0.284609546029793,0,0.173559738335131,0,0.174118413160805,0,0,0,0,0,0.0969890164884194,0,0,0,0.596143835108969,0,0,0.0801588202515337,0,0,0,0,0,0.864328787928898,6.08837424270619,0,0.135904206073614,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0.179287339332845,0,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,1.15571898244382,0,0,0,0,0,0.179088841081487,0,0,0,0,2.02730928783687,0,0,0.303859956177382,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,1.02892805662451,0,0,0,0,0,0,0,0,2.15927591218621,1.43325506366115,0,0,0,0,0,0,0,0,0,0.473328002922261,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,2.11736923029415,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:125563283..125563289,- | |||
}} | }} |
Latest revision as of 01:27, 30 July 2015
Short description: | p@chr4:125563283..125563289, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:125563283..125563289, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 5.38e-13 | 1 |
pigment cell (sensu Vertebrata) | 6.06e-13 | 1 |
iris pigment epithelial cell | 6.06e-13 | 1 |
crystallin accumulating cell | 1.23e-12 | 4 |
vertebrate lens cell | 1.23e-12 | 4 |
lens epithelial cell | 1.23e-12 | 4 |
epithelial cell | 1.67e-08 | 253 |
seromucus secreting cell | 3.93e-07 | 2 |
cortical cell of adrenal gland | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
iris epithelium | 6.06e-13 | 1 |
iris | 6.06e-13 | 1 |
cuboidal epithelium | 1.23e-12 | 4 |
transparent eye structure | 1.23e-12 | 4 |
simple cuboidal epithelium | 1.23e-12 | 4 |
cranial placode | 1.23e-12 | 4 |
lens of camera-type eye | 1.23e-12 | 4 |
epithelium of lens | 1.23e-12 | 4 |
lens placode | 1.23e-12 | 4 |
lens vesicle | 1.23e-12 | 4 |
pigment epithelium of eye | 4.03e-10 | 11 |
anterior segment of eyeball | 4.59e-08 | 14 |
bronchoalveolar duct junction | 2.28e-07 | 2 |
alveolar duct | 2.28e-07 | 2 |
bronchiole | 2.28e-07 | 2 |
external ectoderm | 9.38e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 5.38e-13 | 1 |
pleomorphic carcinoma | 9.73e-13 | 1 |
carcinoma | 5.32e-12 | 106 |
cell type cancer | 2.94e-10 | 143 |
lung adenocarcinoma | 2.28e-07 | 2 |
clear cell adenocarcinoma | 4.98e-07 | 2 |