FFCP PHASE1:Hg19::chr3:71542651..71542683,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:71542651..71542683,-
|short_description=p22@FOXP1
|description=CAGE_peak_22_at_FOXP1_5end
|association_with_transcript=22bp_to_ENST00000327590,uc003don.2_5...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27086 | |EntrezGene=27086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |HGNC=3823 | ||
|TSSclassifier=strong | |||
|UniProt=G5E965 | |UniProt=G5E965 | ||
|association_with_transcript=22bp_to_ENST00000327590,uc003don.2_5end | |||
|cluster_id=chr3:71542651..71542683,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_22_at_FOXP1_5end | |||
|id=chr3:71542651..71542683,- | |||
|ontology_enrichment_celltype=CL:0000791!2.14e-25!18;CL:0000789!2.14e-25!18;CL:0002420!2.14e-25!18;CL:0002419!2.14e-25!18;CL:0000790!2.14e-25!18;CL:0000625!6.16e-18!11;CL:0000084!1.33e-16!25;CL:0000827!1.33e-16!25;CL:0000738!2.09e-12!140;CL:0000838!3.29e-12!52;CL:0000542!7.77e-12!53;CL:0000051!7.77e-12!53;CL:0002087!3.50e-11!119;CL:0000624!6.09e-11!6;CL:0002031!7.95e-10!124;CL:0000037!9.08e-09!172;CL:0000566!9.08e-09!172;CL:0002032!9.00e-08!165;CL:0000837!9.00e-08!165;CL:0000988!1.34e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.43e-56;18!CL:0000789;4.43e-56;18!CL:0002419;4.43e-56;18!CL:0000084;4.13e-39;25!CL:0000625;1.51e-38;11!CL:0000624;1.31e-22;6!CL:0000898;5.81e-12;3!CL:0000542;6.92e-12;53!CL:0000226;1.91e-11;3!CL:0000842;1.91e-11;3!CL:0000623;2.97e-11;3!CL:0000815;2.04e-08;2!CL:0000792;2.04e-08;2!CL:0002677;2.04e-08;2!CL:0002087;5.15e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.29e-56,18;CL:0000789,4.29e-56,18;CL:0002420,4.29e-56,18;CL:0002419,4.29e-56,18;CL:0000790,4.29e-56,18;CL:0000084,4.04e-39,25;CL:0000827,4.04e-39,25;CL:0000625,1.69e-38,11;CL:0000838,2.18e-23,52;CL:0000542,7.55e-23,53;CL:0000051,7.55e-23,53;CL:0000624,1.14e-22,6;CL:0000738,2.93e-17,136;CL:0002087,3.16e-17,115;CL:0000037,1.49e-12,168;CL:0002031,2.88e-12,120;CL:0000898,5.21e-12,3;CL:0000988,1.53e-11,177;CL:0000226,1.84e-11,3;CL:0000842,1.84e-11,3;CL:0000623,2.81e-11,3;CL:0000825,2.81e-11,3;CL:0002032,3.00e-10,161;CL:0000837,3.00e-10,161;CL:0000815,1.86e-08,2;CL:0000792,1.86e-08,2;CL:0002677,1.86e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;4.43e-56;18!CL:0000051;6.92e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.21e-14!15;UBERON:0000179!7.21e-14!15;UBERON:0000463!7.21e-14!15;UBERON:0007023!1.06e-13!115;UBERON:0002390!2.34e-08!102;UBERON:0003061!2.34e-08!102;UBERON:0002193!3.99e-08!112;UBERON:0004177!6.19e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.00e-31;15!UBERON:0000179;8.00e-31;15!UBERON:0000463;8.00e-31;15!UBERON:0002390;1.88e-12;32!UBERON:0002193;2.24e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.48e-31,15;UBERON:0000179,7.48e-31,15;UBERON:0000463,7.48e-31,15;UBERON:0002390,5.92e-07,98;UBERON:0003061,5.92e-07,98;UBERON:0002193,8.51e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,5.75744097145819,0.309632246632152,0,0,0,0,0,0,1.10799081706375,3.00816671205213,4.12320654360118,0.223915474239924,1.6194683300949,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,1.21079900526674,0,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,2.24203425192614,0,29.8998850573026,19.2575273747091,15.8313154229622,0.334372990781356,19.5553359980154,22.7254946752672,13.6378709885538,1.22551502573691,6.77593587192126,8.4182879941776,7.04090045789041,0.128091319725675,0.260118695119756,1.97325485524411,1.10540007114339,2.02862160014537,24.0224232322538,29.4294910898684,15.6803285707465,0.566546713487831,18.3945836928922,17.5249997196141,14.4221224451117,8.28270077242652,8.46408490013344,15.207232711174,8.2816315492775,9.08704939196371,12.4930726552346,10.1814218378927,6.56902397536837,14.9188989986302,9.36040685242276,18.2478748892327,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.88123040807709,5.60631694634745,7.31555306794566,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,7.23688091430106,10.3542816392936,6.61710858381355,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,4.58782324285425,3.41788312304498,6.4322579373603,6.58179636937911,2.59389324477087,3.7802200606668,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.38141957765574,0,0,0,0,0,0,0,0.493217028184668,11.974154617347,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.26446520348538,0,0,0.640724475406168,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.285906176706625,0,0,0,0.801711364730253,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.939839179798536,0.257831551894309,0.0999411559249289,0,0,0,0,0.917458566809082,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0,0.581300188524055,0.186224142887574,0,0.12729431655633,0,0,0,1.88585748440845,0,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,1.61019034872821,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,5.75744097145819,0.309632246632152,0,0,0,0,0,0,1.10799081706375,3.00816671205213,4.12320654360118,0.223915474239924,1.6194683300949,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,1.21079900526674,0,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,2.24203425192614,0,29.8998850573026,19.2575273747091,15.8313154229622,0.334372990781356,19.5553359980154,22.7254946752672,13.6378709885538,1.22551502573691,6.77593587192126,8.4182879941776,7.04090045789041,0.128091319725675,0.260118695119756,1.97325485524411,1.10540007114339,2.02862160014537,24.0224232322538,29.4294910898684,15.6803285707465,0.566546713487831,18.3945836928922,17.5249997196141,14.4221224451117,8.28270077242652,8.46408490013344,15.207232711174,8.2816315492775,9.08704939196371,12.4930726552346,10.1814218378927,6.56902397536837,14.9188989986302,9.36040685242276,18.2478748892327,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.88123040807709,5.60631694634745,7.31555306794566,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,7.23688091430106,10.3542816392936,6.61710858381355,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,3.04468565539302,4.58782324285425,3.41788312304498,6.4322579373603,6.58179636937911,2.59389324477087,3.7802200606668,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,1.38141957765574,0,0,0,0,0,0,0,0.493217028184668,11.974154617347,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.26446520348538,0,0,0.640724475406168,0,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.285906176706625,0,0,0,0.801711364730253,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.939839179798536,0.257831551894309,0.0999411559249289,0,0,0,0,0.917458566809082,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0,0,0,0.426467963801962,0,0.581300188524055,0.186224142887574,0,0.12729431655633,0,0,0,1.88585748440845,0,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,1.61019034872821,0 | ||
|short_description=p22@FOXP1 | |||
}} | }} |
Latest revision as of 13:48, 19 September 2015
Short description: | p22@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_FOXP1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 22bp_to_ENST00000327590, uc003don.2_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | G5E965 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.29e-56 | 18 |
alpha-beta T cell | 4.29e-56 | 18 |
immature T cell | 4.29e-56 | 18 |
mature T cell | 4.29e-56 | 18 |
immature alpha-beta T cell | 4.29e-56 | 18 |
T cell | 4.04e-39 | 25 |
pro-T cell | 4.04e-39 | 25 |
CD8-positive, alpha-beta T cell | 1.69e-38 | 11 |
lymphoid lineage restricted progenitor cell | 2.18e-23 | 52 |
lymphocyte | 7.55e-23 | 53 |
common lymphoid progenitor | 7.55e-23 | 53 |
CD4-positive, alpha-beta T cell | 1.14e-22 | 6 |
leukocyte | 2.93e-17 | 136 |
nongranular leukocyte | 3.16e-17 | 115 |
hematopoietic stem cell | 1.49e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 2.88e-12 | 120 |
naive T cell | 5.21e-12 | 3 |
hematopoietic cell | 1.53e-11 | 177 |
single nucleate cell | 1.84e-11 | 3 |
mononuclear cell | 1.84e-11 | 3 |
natural killer cell | 2.81e-11 | 3 |
pro-NK cell | 2.81e-11 | 3 |
hematopoietic oligopotent progenitor cell | 3.00e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.00e-10 | 161 |
regulatory T cell | 1.86e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.86e-08 | 2 |
naive regulatory T cell | 1.86e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 7.48e-31 | 15 |
haemolymphatic fluid | 7.48e-31 | 15 |
organism substance | 7.48e-31 | 15 |
hematopoietic system | 5.92e-07 | 98 |
blood island | 5.92e-07 | 98 |
hemolymphoid system | 8.51e-07 | 108 |