FFCP PHASE1:Hg19::chr3:71180117..71180134,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:71180117..71180134,-
|short_description=p60@FOXP1
|description=CAGE_peak_60_at_FOXP1_5end
|association_with_transcript=-25bp_to_NM_001244815_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27086 | |EntrezGene=27086 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |HGNC=3823 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFD3 | |UniProt=E9PFD3 | ||
|association_with_transcript=-25bp_to_NM_001244815_5end | |||
|cluster_id=chr3:71180117..71180134,- | |||
|description=CAGE_peak_60_at_FOXP1_5end | |||
|id=chr3:71180117..71180134,- | |||
|ontology_enrichment_celltype=CL:0000542!3.02e-13!53;CL:0000051!3.02e-13!53;CL:0000838!2.32e-12!52;CL:0000945!9.54e-12!24;CL:0000826!9.54e-12!24;CL:0000236!1.92e-11!14;CL:0000738!1.95e-07!140;CL:0002274!7.68e-07!5;CL:0000457!7.68e-07!5;CL:0002191!7.68e-07!5;CL:0000097!7.68e-07!5;CL:0000831!7.68e-07!5;CL:0002028!7.68e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.69e-31;13!CL:0000945;1.22e-21;24!CL:0000542;8.58e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.94e-29,14;CL:0000945,6.94e-22,24;CL:0000826,6.94e-22,24;CL:0000542,8.80e-12,53;CL:0000051,8.80e-12,53;CL:0000838,1.57e-09,52;CL:0002087,4.80e-07,115;CL:0000738,6.74e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.30e-09;1!CL:0000051;8.58e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;1.30e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,8.91e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.93e-19!115;UBERON:0001950!6.45e-18!20;UBERON:0002619!8.15e-16!22;UBERON:0001869!1.02e-15!32;UBERON:0001893!2.20e-14!34;UBERON:0002791!1.93e-13!33;UBERON:0000956!2.74e-13!25;UBERON:0000203!2.74e-13!25;UBERON:0002780!5.70e-13!41;UBERON:0001890!5.70e-13!41;UBERON:0006240!5.70e-13!41;UBERON:0002020!7.46e-13!34;UBERON:0003528!7.46e-13!34;UBERON:0003080!1.74e-12!42;UBERON:0001049!7.82e-10!57;UBERON:0005068!7.82e-10!57;UBERON:0006241!7.82e-10!57;UBERON:0007135!7.82e-10!57;UBERON:0002616!4.03e-09!59;UBERON:0003056!4.09e-09!61;UBERON:0000200!6.67e-09!6;UBERON:0003075!9.04e-08!86;UBERON:0007284!9.04e-08!86;UBERON:0002021!1.54e-07!5;UBERON:0000955!2.53e-07!69;UBERON:0006238!2.53e-07!69;UBERON:0002346!4.85e-07!90;UBERON:0001017!9.19e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.74e-18;20!UBERON:0002619;8.12e-17;22!UBERON:0002021;1.86e-15;5!UBERON:0000956;8.56e-15;25!UBERON:0000203;8.56e-15;25!UBERON:0002791;8.08e-11;32!UBERON:0001869;2.49e-10;32!UBERON:0001893;6.00e-10;34!UBERON:0002022;1.30e-09;1!UBERON:0001154;1.30e-09;1!UBERON:0001153;1.30e-09;1!UBERON:0009854;1.30e-09;1!UBERON:0003528;1.16e-07;34!UBERON:0002020;1.16e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.96e-18,20;UBERON:0002619,1.31e-16,22;UBERON:0002021,1.74e-15,5;UBERON:0000956,1.30e-14,25;UBERON:0000203,1.30e-14,25;UBERON:0002791,2.33e-11,32;UBERON:0001869,2.33e-11,32;UBERON:0003528,1.14e-10,34;UBERON:0002020,1.14e-10,34;UBERON:0001893,1.14e-10,34;UBERON:0001154,1.15e-09,1;UBERON:0001153,1.15e-09,1;UBERON:0001045,1.15e-09,1;UBERON:0002022,1.76e-09,1;UBERON:0002780,9.12e-09,41;UBERON:0001890,9.12e-09,41;UBERON:0003080,9.12e-09,41;UBERON:0006240,9.12e-09,41 | |||
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| ||
|short_description=p60@FOXP1 | |||
}} | }} |
Latest revision as of 13:11, 19 September 2015
Short description: | p60@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_60_at_FOXP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_NM_001244815_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | E9PFD3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.94e-29 | 14 |
lymphocyte of B lineage | 6.94e-22 | 24 |
pro-B cell | 6.94e-22 | 24 |
lymphocyte | 8.80e-12 | 53 |
common lymphoid progenitor | 8.80e-12 | 53 |
lymphoid lineage restricted progenitor cell | 1.57e-09 | 52 |
nongranular leukocyte | 4.80e-07 | 115 |
leukocyte | 6.74e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
neocortex | 2.96e-18 | 20 |
regional part of cerebral cortex | 1.31e-16 | 22 |
occipital lobe | 1.74e-15 | 5 |
cerebral cortex | 1.30e-14 | 25 |
pallium | 1.30e-14 | 25 |
regional part of telencephalon | 2.33e-11 | 32 |
cerebral hemisphere | 2.33e-11 | 32 |
brain grey matter | 1.14e-10 | 34 |
gray matter | 1.14e-10 | 34 |
telencephalon | 1.14e-10 | 34 |
vermiform appendix | 1.15e-09 | 1 |
caecum | 1.15e-09 | 1 |
midgut | 1.15e-09 | 1 |
insula | 1.76e-09 | 1 |
regional part of forebrain | 9.12e-09 | 41 |
forebrain | 9.12e-09 | 41 |
anterior neural tube | 9.12e-09 | 41 |
future forebrain | 9.12e-09 | 41 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 8.91e-10 | 1 |