FFCP PHASE1:Hg19::chr3:69985734..69985749,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:69985734..69985749,+
|short_description=p2@MITF
|description=CAGE_peak_2_at_MITF_5end
|association_with_transcript=0bp_to_ENST00000314557_5end
|EntrezGene...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4286 | |EntrezGene=4286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |HGNC=7105 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000314557_5end | |||
|cluster_id=chr3:69985734..69985749,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_2_at_MITF_5end | |||
|id=chr3:69985734..69985749,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.16e-38!10;CL:0000541!1.16e-38!10;CL:0000147!2.93e-34!14;CL:0002567!2.88e-19!3;CL:0000453!5.32e-19!5;CL:0000710!9.80e-19!20;CL:0000325!6.51e-14!39;CL:0002077!1.26e-13!33;CL:0000075!1.47e-13!27;CL:0002274!2.64e-11!5;CL:0000457!2.64e-11!5;CL:0002191!2.64e-11!5;CL:0000097!2.64e-11!5;CL:0000831!2.64e-11!5;CL:0002028!2.64e-11!5;CL:0000990!1.24e-10!8;CL:0000451!1.01e-08!10;CL:0000333!4.69e-08!41;CL:0002566!9.91e-08!1;CL:0000149!5.36e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000148;9.48e-64;10!CL:0000147;2.51e-45;14!CL:0000710;1.72e-31;20!CL:0002567;6.02e-31;3!CL:0000075;4.18e-23;27!CL:0000097;4.31e-18;5!CL:0002077;3.42e-16;34!CL:0002566;8.62e-12;1!CL:0000163;2.57e-10;9!CL:0000453;9.95e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.75e-64,10;CL:0000541,8.75e-64,10;CL:0000147,2.37e-45,14;CL:0000710,1.66e-31,20;CL:0002567,6.02e-31,3;CL:0000075,4.06e-23,27;CL:0002077,3.57e-18,34;CL:0000097,4.58e-18,5;CL:0002028,4.58e-18,5;CL:0000333,3.56e-14,41;CL:0002566,8.62e-12,1;CL:0000163,2.66e-10,9;CL:0000133,1.04e-09,59;CL:0000453,8.84e-09,5;CL:0000221,7.89e-08,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!1.66e-13!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.30e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.31e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0002240!1.24e-08!3;UBERON:0007029!2.09e-07!1;UBERON:0000989!3.62e-07!1;UBERON:0008811!3.62e-07!1;UBERON:0006258!3.62e-07!1;UBERON:0005876!3.62e-07!1;UBERON:0004874!3.62e-07!1;UBERON:0001003!4.31e-07!14;UBERON:0007376!4.31e-07!14;UBERON:0007383!4.31e-07!14;UBERON:0002336!6.20e-07!1;UBERON:0001018!6.20e-07!1;UBERON:0002473!6.20e-07!1;UBERON:0005340!6.20e-07!1;UBERON:0002316!6.20e-07!1;UBERON:0003544!6.20e-07!1;UBERON:0001020!6.20e-07!1;UBERON:0005970!6.20e-07!1;UBERON:0002437!6.20e-07!1;UBERON:0002372!6.57e-07!1;UBERON:0001961!6.57e-07!1;UBERON:0001744!6.57e-07!1;UBERON:0001735!6.57e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.82e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.96e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34759371519982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,1.15295962733569,1.64115163454294,464.360100958632,178.770583161274,219.196626282788,51.3217338068116,209.665257622077,230.363125366285,399.871179250179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9353685122798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3720933372727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,145.583152839982,298.596738888036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94860308839388,0.132864840313363,1.30852315404675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,149.243024240858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88568794447312,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34759371519982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,1.15295962733569,1.64115163454294,464.360100958632,178.770583161274,219.196626282788,51.3217338068116,209.665257622077,230.363125366285,399.871179250179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9353685122798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3720933372727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,145.583152839982,298.596738888036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94860308839388,0.132864840313363,1.30852315404675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,149.243024240858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88568794447312,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@MITF | |||
}} | }} |
Latest revision as of 12:24, 19 September 2015
Short description: | p2@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MITF_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000314557_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.75e-64 | 10 |
melanoblast | 8.75e-64 | 10 |
pigment cell | 2.37e-45 | 14 |
neurecto-epithelial cell | 1.66e-31 | 20 |
light melanocyte | 6.02e-31 | 3 |
columnar/cuboidal epithelial cell | 4.06e-23 | 27 |
ecto-epithelial cell | 3.57e-18 | 34 |
mast cell | 4.58e-18 | 5 |
basophil mast progenitor cell | 4.58e-18 | 5 |
migratory neural crest cell | 3.56e-14 | 41 |
dark melanocyte | 8.62e-12 | 1 |
endocrine cell | 2.66e-10 | 9 |
neurectodermal cell | 1.04e-09 | 59 |
Langerhans cell | 8.84e-09 | 5 |
ectodermal cell | 7.89e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
surface | 2.96e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.31e-21 | 2 |