FFCP PHASE1:Hg19::chr3:66548985..66548989,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:66548985..66548989,-
|short_description=p3@LRIG1
|description=CAGE_peak_3_at_LRIG1_5end
|association_with_transcript=-302bp_to_ENST00000475366_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26018 | |EntrezGene=26018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17360 | |HGNC=17360 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-302bp_to_ENST00000475366_5end | |||
|cluster_id=chr3:66548985..66548989,- | |||
|description=CAGE_peak_3_at_LRIG1_5end | |||
|id=chr3:66548985..66548989,- | |||
|ontology_enrichment_celltype=CL:0000791!1.16e-11!18;CL:0000789!1.16e-11!18;CL:0002420!1.16e-11!18;CL:0002419!1.16e-11!18;CL:0000790!1.16e-11!18;CL:0000542!2.77e-09!53;CL:0000051!2.77e-09!53;CL:0000838!6.31e-09!52;CL:0000084!3.63e-08!25;CL:0000827!3.63e-08!25;CL:0000624!1.31e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.41e-47;18!CL:0000789;4.41e-47;18!CL:0002419;4.41e-47;18!CL:0000624;9.38e-37;6!CL:0000084;1.66e-33;25!CL:0000625;1.05e-19;11!CL:0000542;1.42e-18;53!CL:0000898;9.35e-13;3!CL:0000623;1.78e-12;3!CL:0000817;5.53e-10;1!CL:0000895;5.53e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.01e-47,18;CL:0000789,9.01e-47,18;CL:0002420,9.01e-47,18;CL:0002419,9.01e-47,18;CL:0000790,9.01e-47,18;CL:0000624,1.53e-36,6;CL:0000084,2.77e-33,25;CL:0000827,2.77e-33,25;CL:0000838,1.62e-30,52;CL:0000542,6.74e-30,53;CL:0000051,6.74e-30,53;CL:0000625,1.44e-19,11;CL:0002087,2.43e-14,115;CL:0002031,1.22e-13,120;CL:0000898,1.12e-12,3;CL:0000623,1.12e-12,3;CL:0000825,1.12e-12,3;CL:0000738,9.57e-12,136;CL:0000810,8.24e-10,1;CL:0000895,8.24e-10,1;CL:0002436,8.24e-10,1;CL:0002427,8.24e-10,1;CL:0002428,8.24e-10,1;CL:0002429,8.24e-10,1;CL:0002433,8.24e-10,1;CL:0002431,8.24e-10,1;CL:0002432,8.24e-10,1;CL:0002032,1.57e-09,161;CL:0000837,1.57e-09,161;CL:0000037,4.99e-09,168;CL:0000988,1.94e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000790;4.41e-47;18!CL:0000051;1.42e-18;53!CL:0002427;5.53e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;5.53e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,5.30e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.13e-19!57;UBERON:0005068!3.13e-19!57;UBERON:0006241!3.13e-19!57;UBERON:0007135!3.13e-19!57;UBERON:0002780!6.92e-18!41;UBERON:0001890!6.92e-18!41;UBERON:0006240!6.92e-18!41;UBERON:0001017!2.62e-17!82;UBERON:0003080!3.44e-17!42;UBERON:0007023!8.48e-17!115;UBERON:0005743!1.54e-16!86;UBERON:0001893!1.81e-15!34;UBERON:0002791!5.21e-15!33;UBERON:0000955!1.10e-14!69;UBERON:0006238!1.10e-14!69;UBERON:0002616!1.65e-14!59;UBERON:0000073!3.66e-14!94;UBERON:0001016!3.66e-14!94;UBERON:0002020!4.43e-14!34;UBERON:0003528!4.43e-14!34;UBERON:0001869!7.12e-14!32;UBERON:0002346!8.54e-12!90;UBERON:0003075!1.67e-11!86;UBERON:0007284!1.67e-11!86;UBERON:0000956!4.08e-11!25;UBERON:0000203!4.08e-11!25;UBERON:0003056!6.63e-11!61;UBERON:0002619!3.95e-09!22;UBERON:0000153!8.65e-08!129;UBERON:0007811!8.65e-08!129;UBERON:0001950!1.31e-07!20;UBERON:0000033!6.80e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;5.53e-10;1!UBERON:0007029;5.53e-10;1!UBERON:0011215;5.53e-10;1!UBERON:0001018;5.53e-10;1!UBERON:0002473;5.53e-10;1!UBERON:0005340;5.53e-10;1!UBERON:0003544;5.53e-10;1!UBERON:0005970;5.53e-10;1!UBERON:0002316;5.53e-10;1!UBERON:0001020;5.53e-10;1!UBERON:0002437;5.53e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,4.85e-10,1;UBERON:0002336,9.82e-10,1;UBERON:0011215,9.82e-10,1;UBERON:0001018,9.82e-10,1;UBERON:0002473,9.82e-10,1;UBERON:0005340,9.82e-10,1;UBERON:0003544,9.82e-10,1;UBERON:0005970,9.82e-10,1;UBERON:0002316,9.82e-10,1;UBERON:0001020,9.82e-10,1;UBERON:0002437,9.82e-10,1 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.273748850145768,0.376627918784408,0.0764134057479513,0.410502947249729,0,0,0.383829398097213,0,0,0,0,1.85921281392724,0.710846162437108,0,1.10799081706375,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,1.180258620683,2.35806457649499,2.67281948699362,0,0.32592226663359,0.473447805734733,0,0,2.94605907474837,1.99380505125259,1.35401931882508,0.128091319725675,0.390178042679635,0.328875809207352,0,0,0,0,0,0,1.14966148080576,1.03088233644789,2.02415753615602,0,1.30216690771284,0.950452044448374,0,0.127986611154418,1.24930726552346,0.236777252044017,0,1.00803371612366,4.01160293675261,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.130979075497713,0,0,0,0,0,0.238490624305342,0,0,0.39752481473341,0,0,0,0,0,0.417989933073621,0,0,0.33472061276467,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.336255431980582,0.394061520403854,1.50939302401662,1.66845947163673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,0.862856803274467,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0.822724546172388,0,0,0,0,0.962479855263359,0,0.185803175125719,1.73123055571734,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0.445234820091624,0,0.63337622438398,0.996239941255349,0.276283915531148,0,0.20453736500431,0,0,0,0.358042349351218,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0.61221999997337,0,0.1137934482855,0,0.236387681767936,0.344743373241465,0.583209226766509,0.173624994933292,0.885741385813839,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.461701551022782,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0.141353071433941,0.216388639742091,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,1.07841812769083,0,0,0,0,0,0,0,0,0.126373159256976,0,0.207376382794494,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0.429765441419957,0.788662062837943,0,0,0,0,0,0,0.335917362433631,0,0,0.157566364614447,0,0.202210631562555,0.196854963029498,0.0846733320657845,0.795229689809303,0.681017030557878,0.964518890790115,0.412618309791701,0.83088067605837,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0.171086837884329,0,0,0,0.828478110694391,0.496166021811951,0,0.852548188666271,0,0,0.5013797880454,0.612691153526923,0,0.157054096250234,0.886068179966986,0.244052529803926,0.1251909307065,0,0.443716206147409,0.683060432355218,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0.327609848846413,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0.255788742607303,0,0,0,0,0.850299680406731,0.123935764259002,0,0,0.157723490002507,0,0.705351887381368,0,0.192687675289379,0,0.159633859057151,0.41023272848151,0.504143392443436,0.207471757392654,0.322951291263702,0,0,0.11796972334774,0,0,0,0,0,0,0,0.781514011233092,0,0.49131575253029,0,0.202612753855184,1.56215619722769,0.206686796501184,0.19024743058172,0,0,0,0,0.127762427639595,0.535701835878287,0.336283722218824,0.606965604236632,0,0.0887023701626388,0,1.37190407549935,0.271878931907327,0.394636641377094,0.118193840883968,0,0.156986185701028,0.471346769748006,0,0.913158720509496,0,0.47775168788705,0.214429632529969,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0.102662806856247,0,1.45713297917742,0,0,0,0.45178432815584,0.219881033490858,0.301925687133347,0.0771741581079447,0,0,0,0,0.7852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| ||
|short_description=p3@LRIG1 | |||
}} | }} |
Latest revision as of 10:36, 19 September 2015
Short description: | p3@LRIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRIG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -302bp_to_ENST00000475366_5end |
EntrezGene: | LRIG1 |
HGNC: | 17360 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface | 4.85e-10 | 1 |
corpus callosum | 9.82e-10 | 1 |
central nervous system cell part cluster | 9.82e-10 | 1 |
axon tract | 9.82e-10 | 1 |
intercerebral commissure | 9.82e-10 | 1 |
dorsal telencephalic commissure | 9.82e-10 | 1 |
brain white matter | 9.82e-10 | 1 |
brain commissure | 9.82e-10 | 1 |
white matter | 9.82e-10 | 1 |
nervous system commissure | 9.82e-10 | 1 |
cerebral hemisphere white matter | 9.82e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 5.30e-10 | 1 |