FFCP PHASE1:Hg19::chr3:64253837..64253863,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:64253837..64253863,-
|short_description=p1@PRICKLE2
|description=CAGE_peak_1_at_PRICKLE2_5end
|association_with_transcript=-182bp_to_ENST00000498162_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=166336 | |EntrezGene=166336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20340 | |HGNC=20340 | ||
|TSSclassifier=strong | |||
|UniProt=C9JY03 | |UniProt=C9JY03 | ||
|association_with_transcript=-182bp_to_ENST00000498162_5end | |||
|cluster_id=chr3:64253837..64253863,- | |||
|coexpression_cluster_id=C2746 | |||
|description=CAGE_peak_1_at_PRICKLE2_5end | |||
|id=chr3:64253837..64253863,- | |||
|ontology_enrichment_celltype=CL:0000055!3.89e-18!180;CL:0000680!3.58e-11!57;CL:0000056!3.58e-11!57;CL:0000355!3.58e-11!57;CL:0000187!1.43e-10!54;CL:0000183!5.94e-10!59;CL:0000136!1.25e-09!15;CL:0000393!7.35e-09!60;CL:0000211!7.35e-09!60;CL:0000192!1.08e-08!42;CL:0000514!1.08e-08!42;CL:0000057!2.41e-08!75;CL:0000359!3.15e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.40e-09;13!CL:0000359;4.99e-07;32!CL:0000192;8.64e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,9.70e-12,58;CL:0000056,9.70e-12,58;CL:0000355,9.70e-12,58;CL:0000187,4.09e-11,55;CL:0000136,6.51e-10,15;CL:0000192,3.61e-09,43;CL:0000514,3.61e-09,43;CL:0000057,4.91e-09,76;CL:0000393,1.98e-08,61;CL:0000211,1.98e-08,61;CL:0000359,1.99e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;8.64e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!6.18e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.24e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.36e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!5.26e-31!365;UBERON:0000481!1.86e-23!347;UBERON:0000119!1.64e-22!312;UBERON:0007023!2.66e-22!115;UBERON:0000483!2.74e-22!309;UBERON:0000955!2.29e-21!69;UBERON:0006238!2.29e-21!69;UBERON:0000033!3.70e-21!123;UBERON:0003075!1.06e-20!86;UBERON:0007284!1.06e-20!86;UBERON:0001017!1.43e-20!82;UBERON:0000153!3.18e-20!129;UBERON:0007811!3.18e-20!129;UBERON:0004121!3.62e-20!169;UBERON:0005743!4.12e-20!86;UBERON:0002616!8.59e-20!59;UBERON:0001049!2.42e-19!57;UBERON:0005068!2.42e-19!57;UBERON:0006241!2.42e-19!57;UBERON:0007135!2.42e-19!57;UBERON:0000924!1.15e-18!173;UBERON:0006601!1.15e-18!173;UBERON:0002346!2.09e-18!90;UBERON:0000468!2.34e-17!659;UBERON:0000073!3.89e-17!94;UBERON:0001016!3.89e-17!94;UBERON:0003080!1.32e-16!42;UBERON:0003056!1.84e-16!61;UBERON:0004111!4.11e-16!241;UBERON:0000477!4.91e-16!286;UBERON:0002780!6.08e-16!41;UBERON:0001890!6.08e-16!41;UBERON:0006240!6.08e-16!41;UBERON:0000914!1.11e-14!83;UBERON:0002329!1.11e-14!83;UBERON:0003077!1.11e-14!83;UBERON:0003059!1.11e-14!83;UBERON:0007282!1.11e-14!83;UBERON:0009618!1.11e-14!83;UBERON:0007285!1.11e-14!83;UBERON:0000025!2.13e-14!194;UBERON:0002020!3.98e-14!34;UBERON:0003528!3.98e-14!34;UBERON:0000467!6.12e-14!625;UBERON:0001893!9.52e-14!34;UBERON:0000480!1.08e-13!626;UBERON:0001869!1.15e-13!32;UBERON:0004290!1.63e-13!70;UBERON:0002791!2.80e-13!33;UBERON:0002385!1.23e-12!63;UBERON:0001015!1.23e-12!63;UBERON:0000383!1.23e-12!63;UBERON:0000922!2.22e-12!612;UBERON:0002050!3.73e-12!605;UBERON:0005423!3.73e-12!605;UBERON:0000486!4.09e-12!82;UBERON:0005256!6.23e-12!143;UBERON:0001134!6.43e-12!61;UBERON:0002036!6.43e-12!61;UBERON:0003082!6.43e-12!61;UBERON:0000923!9.31e-12!604;UBERON:0005291!9.31e-12!604;UBERON:0006598!9.31e-12!604;UBERON:0002532!9.31e-12!604;UBERON:0000956!2.12e-11!25;UBERON:0000203!2.12e-11!25;UBERON:0002619!1.29e-10!22;UBERON:0000062!9.07e-10!511;UBERON:0001950!2.36e-09!20;UBERON:0000479!5.70e-09!787;UBERON:0002100!1.25e-08!216;UBERON:0000064!5.25e-08!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.98e-13;32!UBERON:0003528;1.36e-12;34!UBERON:0002020;1.36e-12;34!UBERON:0002791;2.03e-12;32!UBERON:0001893;3.13e-12;34!UBERON:0002780;5.85e-12;41!UBERON:0001890;5.85e-12;41!UBERON:0000956;1.01e-11;25!UBERON:0000203;1.01e-11;25!UBERON:0002619;7.16e-11;22!UBERON:0000073;2.06e-10;53!UBERON:0002616;2.06e-10;53!UBERON:0000955;5.99e-10;68!UBERON:0001017;6.82e-10;75!UBERON:0001950;1.44e-09;20!UBERON:0002385;5.18e-08;31!UBERON:0001015;5.18e-08;31!UBERON:0000383;5.18e-08;31!UBERON:0001016;1.81e-07;83!UBERON:0007023;9.91e-07;114 | |||
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| ||
|short_description=p1@PRICKLE2 | |||
}} | }} |
Latest revision as of 09:20, 19 September 2015
Short description: | p1@PRICKLE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRICKLE2_5end |
Coexpression cluster: | C2746_mature_breast_colon_uterus_vagina_hippocampus_smooth |
Association with transcript: | -182bp_to_ENST00000498162_5end |
EntrezGene: | PRICKLE2 |
HGNC: | 20340 |
UniProt: | C9JY03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 9.70e-12 | 58 |
myoblast | 9.70e-12 | 58 |
multi-potent skeletal muscle stem cell | 9.70e-12 | 58 |
muscle cell | 4.09e-11 | 55 |
fat cell | 6.51e-10 | 15 |
smooth muscle cell | 3.61e-09 | 43 |
smooth muscle myoblast | 3.61e-09 | 43 |
fibroblast | 4.91e-09 | 76 |
electrically responsive cell | 1.98e-08 | 61 |
electrically active cell | 1.98e-08 | 61 |
vascular associated smooth muscle cell | 1.99e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.36e-07 | 14 |