FFCP PHASE1:Hg19::chr3:58612803..58612815,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:58612803..58612815,-
|short_description=p15@FAM107A
|description=CAGE_peak_15_at_FAM107A_5end
|association_with_transcript=331bp_to_ENST00000497310_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11170 | |EntrezGene=11170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30827 | |HGNC=30827 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=331bp_to_ENST00000497310_5end | |||
|cluster_id=chr3:58612803..58612815,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_15_at_FAM107A_5end | |||
|id=chr3:58612803..58612815,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.91e-60!57;UBERON:0005068!3.91e-60!57;UBERON:0006241!3.91e-60!57;UBERON:0007135!3.91e-60!57;UBERON:0002780!1.48e-59!41;UBERON:0001890!1.48e-59!41;UBERON:0006240!1.48e-59!41;UBERON:0005743!1.59e-58!86;UBERON:0003080!5.10e-58!42;UBERON:0001893!1.24e-55!34;UBERON:0001017!1.50e-54!82;UBERON:0001869!3.07e-54!32;UBERON:0002616!6.47e-54!59;UBERON:0003075!1.48e-52!86;UBERON:0007284!1.48e-52!86;UBERON:0002791!1.80e-52!33;UBERON:0000073!2.68e-52!94;UBERON:0001016!2.68e-52!94;UBERON:0000955!2.62e-51!69;UBERON:0006238!2.62e-51!69;UBERON:0002346!7.01e-50!90;UBERON:0003056!8.32e-49!61;UBERON:0002619!2.41e-47!22;UBERON:0002020!3.12e-46!34;UBERON:0003528!3.12e-46!34;UBERON:0007023!9.77e-43!115;UBERON:0000956!2.12e-41!25;UBERON:0000203!2.12e-41!25;UBERON:0001950!2.44e-40!20;UBERON:0000033!4.69e-39!123;UBERON:0000153!7.17e-37!129;UBERON:0007811!7.17e-37!129;UBERON:0004121!3.85e-31!169;UBERON:0000924!3.15e-30!173;UBERON:0006601!3.15e-30!173;UBERON:0001871!1.32e-17!7;UBERON:0000025!4.34e-15!194;UBERON:0004111!1.19e-13!241;UBERON:0002021!1.36e-13!5;UBERON:0000349!3.05e-13!5;UBERON:0002771!9.43e-13!3;UBERON:0000477!3.76e-11!286;UBERON:0002420!4.43e-11!9;UBERON:0007245!4.43e-11!9;UBERON:0010009!4.43e-11!9;UBERON:0010011!4.43e-11!9;UBERON:0000454!4.43e-11!9;UBERON:0000200!7.63e-11!6;UBERON:0000475!9.97e-11!365;UBERON:0000483!1.58e-10!309;UBERON:0000064!1.60e-10!219;UBERON:0000119!2.41e-10!312;UBERON:0000369!7.99e-10!4;UBERON:0002435!7.99e-10!4;UBERON:0000204!7.99e-10!4;UBERON:0010082!7.99e-10!4;UBERON:0001897!8.85e-10!2;UBERON:0009663!1.93e-09!7;UBERON:0001954!3.12e-09!2;UBERON:0003022!3.12e-09!2;UBERON:0002421!3.12e-09!2;UBERON:0002600!3.12e-09!2;UBERON:0002360!1.23e-08!2;UBERON:0000094!1.23e-08!2;UBERON:0007645!1.23e-08!2;UBERON:0001872!3.09e-08!5;UBERON:0000062!2.08e-07!511;UBERON:0002308!2.36e-07!9;UBERON:0000125!2.36e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24 | |||
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| ||
|short_description=p15@FAM107A | |||
}} | }} |
Latest revision as of 06:25, 19 September 2015
Short description: | p15@FAM107A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_FAM107A_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 331bp_to_ENST00000497310_5end |
EntrezGene: | FAM107A |
HGNC: | 30827 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.86e-20 | 21 |
visual system | 4.86e-20 | 21 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
sense organ | 1.03e-17 | 24 |
sensory system | 1.03e-17 | 24 |
entire sense organ system | 1.03e-17 | 24 |