FFCP PHASE1:Hg19::chr3:50374715..50374736,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11186 | |EntrezGene=11186 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9882 | |HGNC=9882 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TZT2 | |UniProt=Q5TZT2 | ||
|association_with_transcript=13bp_to_BT020047,BT020048_5end | |association_with_transcript=13bp_to_BT020047,BT020048_5end | ||
|cluster_id=chr3:50374715..50374736,- | |||
|description=CAGE_peak_4_at_RASSF1_5end | |description=CAGE_peak_4_at_RASSF1_5end | ||
|id=chr3:50374715..50374736,- | |id=chr3:50374715..50374736,- |
Latest revision as of 19:50, 18 September 2015
Short description: | p4@RASSF1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RASSF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_BT020047, BT020048_5end |
EntrezGene: | RASSF1 |
HGNC: | 9882 |
UniProt: | Q5TZT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@RASSF1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.24e-11 | 43 |
smooth muscle myoblast | 1.24e-11 | 43 |
vascular associated smooth muscle cell | 6.33e-11 | 32 |
muscle precursor cell | 7.19e-10 | 58 |
myoblast | 7.19e-10 | 58 |
multi-potent skeletal muscle stem cell | 7.19e-10 | 58 |
muscle cell | 1.13e-08 | 55 |
multi fate stem cell | 2.50e-08 | 427 |
somatic stem cell | 1.08e-07 | 433 |
stem cell | 1.65e-07 | 441 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
artery | 5.78e-12 | 42 |
arterial blood vessel | 5.78e-12 | 42 |
arterial system | 5.78e-12 | 42 |
circulatory system | 6.23e-11 | 112 |
splanchnic layer of lateral plate mesoderm | 8.68e-11 | 83 |
epithelial tube open at both ends | 9.59e-11 | 59 |
blood vessel | 9.59e-11 | 59 |
blood vasculature | 9.59e-11 | 59 |
vascular cord | 9.59e-11 | 59 |
vasculature | 1.14e-10 | 78 |
Showing 1 to 10 of 32 entries