FFCP PHASE1:Hg19::chr3:49058418..49058449,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:49058418..49058449,-
|short_description=p9@DALRD3
|description=CAGE_peak_9_at_DALRD3_5end
|association_with_transcript=17bp_to_NM_018114,uc003cvm.1,uc010hk...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55152 | |EntrezGene=55152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25536 | |HGNC=25536 | ||
|TSSclassifier=strong | |||
|UniProt=Q5D0E6 | |UniProt=Q5D0E6 | ||
|association_with_transcript=17bp_to_NM_018114,uc003cvm.1,uc010hko.1_5end | |||
|cluster_id=chr3:49058418..49058449,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_9_at_DALRD3_5end | |||
|id=chr3:49058418..49058449,- | |||
|ontology_enrichment_celltype=CL:0000557!1.16e-20!71;CL:0000839!1.34e-19!70;CL:0000763!7.55e-19!112;CL:0000049!7.55e-19!112;CL:0002009!3.45e-18!65;CL:0000766!4.56e-18!76;CL:0002194!1.79e-16!63;CL:0000576!1.79e-16!63;CL:0000040!1.79e-16!63;CL:0000559!1.79e-16!63;CL:0002032!3.55e-12!165;CL:0000837!3.55e-12!165;CL:0000860!4.17e-12!45;CL:0002031!7.24e-12!124;CL:0000738!1.19e-11!140;CL:0000037!1.33e-11!172;CL:0000566!1.33e-11!172;CL:0002057!1.69e-11!42;CL:0000988!3.59e-11!182;CL:0002087!6.87e-08!119;CL:0000453!1.49e-07!5;CL:0000990!2.48e-07!8;CL:0002393!9.45e-07!9;CL:0002397!9.45e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.15e-30;6!CL:0000473;2.73e-13;39!CL:0000234;2.73e-13;39!CL:0002593;3.34e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.40e-30,6;CL:0002593,3.70e-11,2;CL:0000473,1.97e-10,48;CL:0000234,1.97e-10,48;CL:0002194,2.31e-08,59;CL:0000576,2.31e-08,59;CL:0000040,2.31e-08,59;CL:0000559,2.31e-08,59;CL:0002009,4.28e-08,61;CL:0000839,1.71e-07,66;CL:0000557,2.20e-07,67;CL:0000766,7.01e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.75e-09;10!UBERON:0005564;4.75e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.85e-19!102;UBERON:0003061!5.85e-19!102;UBERON:0002371!7.00e-19!80;UBERON:0002193!2.25e-17!112;UBERON:0001474!1.42e-16!86;UBERON:0002405!5.38e-15!115;UBERON:0004765!1.99e-14!101;UBERON:0001434!1.99e-14!101;UBERON:0007023!1.74e-09!115;UBERON:0002204!2.76e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;3.34e-11;2!UBERON:0000473;4.43e-11;8!UBERON:0003135;2.62e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.70e-11,2;UBERON:0000473,4.43e-11,8;UBERON:0003135,2.62e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.305653622991805,0,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0.651032612147555,0.895661896959697,0.32389366601898,0.515151135268373,0.581592955118259,1.13362783106643,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,1.16083695451434,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0.422510572623884,0.425208599930087,0.419317291016752,0.561643155732475,0.150176892841506,0.32145117339416,0.570025487482497,0.39783335439818,0.365328307529268,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,6.61444331263449,0,0,0,0.522389211897802,0.797747763113191,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.488124115096339,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504867548488229,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,1.17002132569619,1.18904929830983,0,0.16798212819886,0,0,0,0,0,0.44024217006613,0.621984346622316,0.576479813667846,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0.219259876645935,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0,0.952927101831156,0.822724546172388,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0.201799707191048,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0,0.208843899010911,0.067401132980677,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0,0,0.189932387867636,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0.272406812223151,0,0,0,0.449947783103001,0.77380195455795,0.242998226632099,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.664324201566815,0.654261577023377,0,0,0,0,0.213383459388282,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,1.02558182120378,0,0.276629009856872,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,0,0.202612753855184,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0.171488009437418,0.203909198930495,0.197318320688547,0,0.111231401892069,0,0.157115589916002,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0.308696632431779,0.874238242015829,0.470317296361523,0,0,0.196308467114945,0,0.4226557275834,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0.917458566809082,0,0,0.203974470572744,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,16.6713136080127,14.7380271585898,0,0.103432995861895,0,0,0.0645889098360061,0.186224142887574,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.305653622991805,0,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0.651032612147555,0.895661896959697,0.32389366601898,0.515151135268373,0.581592955118259,1.13362783106643,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0.612167784741805,0.320929027076094,0,0,0.199463657621632,0,1.16083695451434,0,0,0.502497330513487,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0.422510572623884,0.425208599930087,0.419317291016752,0.561643155732475,0.150176892841506,0.32145117339416,0.570025487482497,0.39783335439818,0.365328307529268,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,6.61444331263449,0,0,0,0.522389211897802,0.797747763113191,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0.488124115096339,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504867548488229,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,1.17002132569619,1.18904929830983,0,0.16798212819886,0,0,0,0,0,0.44024217006613,0.621984346622316,0.576479813667846,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0.219259876645935,0,0.256450125116389,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0,0.952927101831156,0.822724546172388,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0.201799707191048,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.335643173951685,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0,0.208843899010911,0.067401132980677,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0,0,0.189932387867636,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0.0824158583811665,0,0,0,0,0.272406812223151,0,0,0,0.449947783103001,0.77380195455795,0.242998226632099,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.664324201566815,0.654261577023377,0,0,0,0,0.213383459388282,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,1.02558182120378,0,0.276629009856872,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,0,0.202612753855184,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0.171488009437418,0.203909198930495,0.197318320688547,0,0.111231401892069,0,0.157115589916002,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0.308696632431779,0.874238242015829,0.470317296361523,0,0,0.196308467114945,0,0.4226557275834,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0.917458566809082,0,0,0.203974470572744,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,16.6713136080127,14.7380271585898,0,0.103432995861895,0,0,0.0645889098360061,0.186224142887574,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | ||
|short_description=p9@DALRD3 | |||
}} | }} |
Latest revision as of 15:34, 18 September 2015
Short description: | p9@DALRD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_DALRD3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 17bp_to_NM_018114, uc003cvm.1, uc010hko.1_5end |
EntrezGene: | DALRD3 |
HGNC: | 25536 |
UniProt: | Q5D0E6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.40e-30 | 6 |
smooth muscle cell of the internal thoracic artery | 3.70e-11 | 2 |
defensive cell | 1.97e-10 | 48 |
phagocyte | 1.97e-10 | 48 |
monopoietic cell | 2.31e-08 | 59 |
monocyte | 2.31e-08 | 59 |
monoblast | 2.31e-08 | 59 |
promonocyte | 2.31e-08 | 59 |
macrophage dendritic cell progenitor | 4.28e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.71e-07 | 66 |
granulocyte monocyte progenitor cell | 2.20e-07 | 67 |
myeloid leukocyte | 7.01e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 3.70e-11 | 2 |
testis | 4.43e-11 | 8 |
male reproductive organ | 2.62e-08 | 11 |