FFCP PHASE1:Hg19::chr3:47620323..47620366,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:47620323..47620366,-
|short_description=p1@CSPG5
|description=CAGE_peak_1_at_CSPG5_5end
|association_with_transcript=0bp_to_NM_001206943,NM_001206944,NM_00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10675 | |EntrezGene=10675 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2467 | |HGNC=2467 | ||
|TSSclassifier=strong | |||
|UniProt=O95196 | |UniProt=O95196 | ||
|association_with_transcript=0bp_to_NM_001206943,NM_001206944,NM_006574,uc003cro.3,uc003crp.3_5end | |||
|cluster_id=chr3:47620323..47620366,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_CSPG5_5end | |||
|id=chr3:47620323..47620366,- | |||
|ontology_enrichment_celltype=CL:0002319!9.30e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.18e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.16e-09,8;CL:0002319,9.84e-09,25;CL:0000540,9.74e-07,6;CL:0000031,9.74e-07,6;CL:0000404,9.74e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.94e-16;82!UBERON:0006238;2.59e-07;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.22e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;1.32e-48;34!UBERON:0003528;4.76e-48;34!UBERON:0002020;4.76e-48;34!UBERON:0001869;6.15e-48;32!UBERON:0002791;9.70e-48;32!UBERON:0002780;4.28e-43;41!UBERON:0001890;4.28e-43;41!UBERON:0000956;2.25e-41;25!UBERON:0000203;2.25e-41;25!UBERON:0000073;4.72e-40;53!UBERON:0002616;4.72e-40;53!UBERON:0002619;1.26e-37;22!UBERON:0001950;4.14e-34;20!UBERON:0001017;1.29e-31;75!UBERON:0000955;1.80e-31;68!UBERON:0001016;7.42e-28;83!UBERON:0002420;3.02e-16;9!UBERON:0007245;3.02e-16;9!UBERON:0010009;3.02e-16;9!UBERON:0010011;3.02e-16;9!UBERON:0000454;3.02e-16;9!UBERON:0000125;4.90e-16;9!UBERON:0002308;4.90e-16;9!UBERON:0009663;6.68e-13;7!UBERON:0004732;3.95e-12;13!UBERON:0000200;6.17e-12;6!UBERON:0004733;5.07e-11;12!UBERON:0002028;5.07e-11;12!UBERON:0002298;5.65e-11;6!UBERON:0001872;2.80e-10;5!UBERON:0000349;3.25e-10;5!UBERON:0002021;3.34e-10;5!UBERON:0001871;4.27e-10;6!UBERON:0007023;5.45e-10;114!UBERON:0011216;2.39e-09;132!UBERON:0000369;1.64e-08;4!UBERON:0002435;1.64e-08;4!UBERON:0000204;1.64e-08;4!UBERON:0002784;8.96e-08;4!UBERON:0002680;6.51e-07;9!UBERON:0001895;6.51e-07;9!UBERON:0005383;9.07e-07;3!UBERON:0005382;9.07e-07;3!UBERON:0001870;9.16e-07;3 | |||
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| ||
|short_description=p1@CSPG5 | |||
}} | }} |
Latest revision as of 12:44, 18 September 2015
Short description: | p1@CSPG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSPG5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_001206943, NM_001206944, NM_006574, uc003cro.3, uc003crp.3_5end |
EntrezGene: | CSPG5 |
HGNC: | 2467 |
UniProt: | O95196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.16e-09 | 8 |
neural cell | 9.84e-09 | 25 |
neuron | 9.74e-07 | 6 |
neuroblast | 9.74e-07 | 6 |
electrically signaling cell | 9.74e-07 | 6 |