FFCP PHASE1:Hg19::chr3:44666503..44666516,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:44666503..44666516,+
|short_description=p3@ZNF197
|description=CAGE_peak_3_at_ZNF197_5end
|association_with_transcript=0bp_to_ENST00000383744,ENST000005362...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10168 | |EntrezGene=10168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12988 | |HGNC=12988 | ||
|TSSclassifier=strong | |||
|UniProt=Q86VG0,F5H000,O14709,Q7Z6G1 | |UniProt=Q86VG0,F5H000,O14709,Q7Z6G1 | ||
|association_with_transcript=0bp_to_ENST00000383744,ENST00000536299,NM_001024855,NM_006991,uc003cnm.2,uc003cnn.2,uc003cno.2,uc003cnp.2_5end | |||
|cluster_id=chr3:44666503..44666516,+ | |||
|description=CAGE_peak_3_at_ZNF197_5end | |||
|id=chr3:44666503..44666516,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.30e-16!86;UBERON:0001017!1.37e-15!82;UBERON:0000073!1.38e-15!94;UBERON:0001016!1.38e-15!94;UBERON:0007023!3.65e-15!115;UBERON:0000955!6.42e-14!69;UBERON:0006238!6.42e-14!69;UBERON:0001049!1.02e-13!57;UBERON:0005068!1.02e-13!57;UBERON:0006241!1.02e-13!57;UBERON:0007135!1.02e-13!57;UBERON:0002616!1.29e-13!59;UBERON:0000924!4.68e-12!173;UBERON:0006601!4.68e-12!173;UBERON:0002346!1.06e-11!90;UBERON:0004121!3.32e-11!169;UBERON:0003080!5.69e-11!42;UBERON:0003075!9.38e-11!86;UBERON:0007284!9.38e-11!86;UBERON:0002780!1.12e-10!41;UBERON:0001890!1.12e-10!41;UBERON:0006240!1.12e-10!41;UBERON:0000033!1.64e-10!123;UBERON:0000153!1.66e-10!129;UBERON:0007811!1.66e-10!129;UBERON:0002020!5.33e-10!34;UBERON:0003528!5.33e-10!34;UBERON:0002791!4.88e-09!33;UBERON:0001893!7.68e-09!34;UBERON:0003056!1.48e-08!61;UBERON:0001869!2.00e-08!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.50e-10;34!UBERON:0002020;5.50e-10;34!UBERON:0002791;6.16e-10;32!UBERON:0000073;1.10e-09;53!UBERON:0002616;1.10e-09;53!UBERON:0002780;1.13e-09;41!UBERON:0001890;1.13e-09;41!UBERON:0001869;5.45e-09;32!UBERON:0001893;4.00e-08;34!UBERON:0000955;2.20e-07;68!UBERON:0001016;3.40e-07;83!UBERON:0001017;3.70e-07;75!UBERON:0000956;3.77e-07;25!UBERON:0000203;3.77e-07;25!UBERON:0002619;9.68e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.00e-17,81;UBERON:0001049,5.22e-16,56;UBERON:0005068,5.22e-16,56;UBERON:0006241,5.22e-16,56;UBERON:0007135,5.22e-16,56;UBERON:0001016,7.41e-16,89;UBERON:0000073,1.84e-15,53;UBERON:0002616,1.84e-15,53;UBERON:0007023,7.73e-15,114;UBERON:0000955,2.02e-14,68;UBERON:0006238,2.02e-14,68;UBERON:0002346,4.52e-14,86;UBERON:0003075,3.78e-13,82;UBERON:0007284,3.78e-13,82;UBERON:0004121,4.81e-12,171;UBERON:0000924,4.81e-12,171;UBERON:0006601,4.81e-12,171;UBERON:0002780,5.07e-12,41;UBERON:0001890,5.07e-12,41;UBERON:0003080,5.07e-12,41;UBERON:0006240,5.07e-12,41;UBERON:0010371,1.85e-11,104;UBERON:0003528,1.88e-11,34;UBERON:0002020,1.88e-11,34;UBERON:0002791,3.10e-10,32;UBERON:0001893,3.99e-09,34;UBERON:0001869,4.33e-09,32;UBERON:0010314,1.16e-08,132;UBERON:0003056,1.32e-08,61;UBERON:0000125,7.13e-07,9;UBERON:0002308,7.13e-07,9;UBERON:0000956,9.32e-07,25;UBERON:0000203,9.32e-07,25 | |||
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| ||
|short_description=p3@ZNF197 | |||
}} | }} |
Latest revision as of 08:01, 18 September 2015
Short description: | p3@ZNF197 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF197_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000383744, ENST00000536299, NM_001024855, NM_006991, uc003cnm.2, uc003cnn.2, uc003cno.2, uc003cnp.2_5end |
EntrezGene: | ZNF197 |
HGNC: | 12988 |
UniProt: | Q86VG0F5H000O14709Q7Z6G1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.00e-17 | 81 |
neural tube | 5.22e-16 | 56 |
neural rod | 5.22e-16 | 56 |
future spinal cord | 5.22e-16 | 56 |
neural keel | 5.22e-16 | 56 |
nervous system | 7.41e-16 | 89 |
regional part of nervous system | 1.84e-15 | 53 |
regional part of brain | 1.84e-15 | 53 |
adult organism | 7.73e-15 | 114 |
brain | 2.02e-14 | 68 |
future brain | 2.02e-14 | 68 |
neurectoderm | 4.52e-14 | 86 |
neural plate | 3.78e-13 | 82 |
presumptive neural plate | 3.78e-13 | 82 |
ectoderm-derived structure | 4.81e-12 | 171 |
ectoderm | 4.81e-12 | 171 |
presumptive ectoderm | 4.81e-12 | 171 |
regional part of forebrain | 5.07e-12 | 41 |
forebrain | 5.07e-12 | 41 |
anterior neural tube | 5.07e-12 | 41 |
future forebrain | 5.07e-12 | 41 |
ecto-epithelium | 1.85e-11 | 104 |
brain grey matter | 1.88e-11 | 34 |
gray matter | 1.88e-11 | 34 |
regional part of telencephalon | 3.10e-10 | 32 |
telencephalon | 3.99e-09 | 34 |
cerebral hemisphere | 4.33e-09 | 32 |
structure with developmental contribution from neural crest | 1.16e-08 | 132 |
pre-chordal neural plate | 1.32e-08 | 61 |
neural nucleus | 7.13e-07 | 9 |
nucleus of brain | 7.13e-07 | 9 |
cerebral cortex | 9.32e-07 | 25 |
pallium | 9.32e-07 | 25 |