FFCP PHASE1:Hg19::chr3:42226164..42226178,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:42226164..42226178,+
|short_description=p@chr3:42226164..42226178,+
|description=CAGE_peak_at_chr3:42226164..42226178,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:42226164..42226178,+ | |||
|coexpression_cluster_id=C3286 | |||
|description=CAGE_peak_at_chr3:42226164..42226178,+ | |||
|id=chr3:42226164..42226178,+ | |||
|ontology_enrichment_celltype=CL:0005020!2.18e-20!6;CL:0002138!2.18e-20!6;CL:0005022!2.18e-20!6;CL:0002139!8.19e-15!24;CL:0000115!5.42e-12!35;CL:0002078!3.76e-09!44;CL:0002144!1.86e-07!3;CL:0002178!2.63e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002138;6.69e-22;6!CL:0002139;9.87e-10;24!CL:0000115;5.63e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,6.23e-22,6;CL:0002138,6.23e-22,6;CL:0005022,6.23e-22,6;CL:0000115,7.44e-10,36;CL:0002139,9.00e-10,24;CL:0002078,7.12e-08,45 | |||
|ontology_enrichment_development_v019=CL:0005022;6.69e-22;6!UBERON:0006298;6.44e-16;1!UBERON:0008801;9.98e-16;1 | |||
|ontology_enrichment_disease=DOID:3493!2.70e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.95e-30;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,6.02e-30,2 | |||
|ontology_enrichment_uberon=UBERON:0002465!5.33e-17!10;UBERON:0001473!3.14e-15!8;UBERON:0004536!3.14e-15!8;UBERON:0006558!3.14e-15!8;UBERON:0001829!2.98e-11!2;UBERON:0003127!7.96e-11!2;UBERON:0004089!8.78e-11!2;UBERON:0001630!1.06e-10!2;UBERON:0005090!1.06e-10!2;UBERON:0000341!2.64e-10!2;UBERON:0001044!3.21e-08!6;UBERON:0003293!3.21e-08!6;UBERON:0003294!3.21e-08!6;UBERON:0010047!3.21e-08!6;UBERON:0000167!3.21e-08!6;UBERON:0001915!1.86e-07!3;UBERON:0001982!1.86e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;8.04e-30;2!UBERON:0001044;2.63e-22;6!UBERON:0003293;2.63e-22;6!UBERON:0003294;2.63e-22;6!UBERON:0010047;2.63e-22;6!UBERON:0003408;2.63e-22;6!UBERON:0000167;2.63e-22;6!UBERON:0001041;8.34e-17;14!UBERON:0001473;1.34e-16;8!UBERON:0004536;1.34e-16;8!UBERON:0006558;1.34e-16;8!UBERON:0001736;6.44e-16;1!UBERON:0001831;9.98e-16;1!UBERON:0001567;9.98e-16;1!UBERON:0002465;2.07e-13;10!UBERON:0004921;7.63e-09;33!UBERON:0004089;1.61e-08;2!UBERON:0003127;2.48e-08;2!UBERON:0000161;1.91e-07;19!UBERON:0000166;1.91e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,8.05e-30,2;UBERON:0001044,2.64e-22,6;UBERON:0003293,2.64e-22,6;UBERON:0003294,2.64e-22,6;UBERON:0010047,2.64e-22,6;UBERON:0000167,2.64e-22,6;UBERON:0001473,1.27e-16,8;UBERON:0004536,1.27e-16,8;UBERON:0006558,1.27e-16,8;UBERON:0001736,6.44e-16,1;UBERON:0006298,6.44e-16,1;UBERON:0001831,9.99e-16,1;UBERON:0001567,9.99e-16,1;UBERON:0008801,9.99e-16,1;UBERON:0003408,1.19e-13,10;UBERON:0002465,1.99e-13,10;UBERON:0004089,1.61e-08,2;UBERON:0003127,2.67e-08,2 | |||
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|short_description=p@chr3:42226164..42226178,+ | |||
}} | }} |
Latest revision as of 20:59, 29 July 2015
Short description: | p@chr3:42226164..42226178, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:42226164..42226178, + |
Coexpression cluster: | C3286_signet_submaxillary_salivary_parotid_Lymphatic_Endothelial_epitheloid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 6.23e-22 | 6 |
endothelial cell of lymphatic vessel | 6.23e-22 | 6 |
vascular lymphangioblast | 6.23e-22 | 6 |
endothelial cell | 7.44e-10 | 36 |
endothelial cell of vascular tree | 9.00e-10 | 24 |
meso-epithelial cell | 7.12e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 8.05e-30 | 2 |
saliva-secreting gland | 2.64e-22 | 6 |
gland of oral region | 2.64e-22 | 6 |
gland of foregut | 2.64e-22 | 6 |
oral gland | 2.64e-22 | 6 |
oral cavity | 2.64e-22 | 6 |
lymphatic vessel | 1.27e-16 | 8 |
lymph vasculature | 1.27e-16 | 8 |
lymphatic part of lymphoid system | 1.27e-16 | 8 |
submandibular gland | 6.44e-16 | 1 |
submandibular gland primordium | 6.44e-16 | 1 |
parotid gland | 9.99e-16 | 1 |
cheek | 9.99e-16 | 1 |
parotid gland primordium | 9.99e-16 | 1 |
gland of gut | 1.19e-13 | 10 |
lymphoid system | 1.99e-13 | 10 |
midface | 1.61e-08 | 2 |
open tracheal system trachea | 2.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.02e-30 | 2 |