FFCP PHASE1:Hg19::chr3:29739726..29739732,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:29739726..29739732,+
|short_description=p14@RBMS3
|description=CAGE_peak_14_at_RBMS3_5end
|association_with_transcript=42bp_to_ENST00000478716_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27303 | |EntrezGene=27303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13427 | |HGNC=13427 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_ENST00000478716_5end | |||
|cluster_id=chr3:29739726..29739732,+ | |||
|coexpression_cluster_id=C4323 | |||
|description=CAGE_peak_14_at_RBMS3_5end | |||
|id=chr3:29739726..29739732,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.01e-19!75;CL:0000055!7.91e-18!180;CL:0002620!3.38e-16!23;CL:0002580!1.52e-09!3;CL:0002579!1.79e-09!3;CL:0002615!3.24e-09!3;CL:0002334!3.47e-08!12;CL:0000136!4.79e-08!15;CL:0000048!6.76e-07!430;CL:0002617!9.47e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.34e-27;3!CL:0002579;2.72e-27;3!CL:0002334;2.19e-26;12!CL:0002617;2.32e-18;2!CL:0002615;8.09e-13;3!CL:0000136;4.92e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.34e-27,3;CL:0002579,2.28e-27,3;CL:0002334,2.01e-26,12;CL:0002617,1.71e-18,2;CL:0002615,8.84e-13,3;CL:0000057,5.28e-10,76;CL:0000136,1.32e-09,15;CL:0000062,1.25e-07,11;CL:0000375,1.25e-07,11;CL:0000335,1.25e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;1.15e-07;11 | |||
|ontology_enrichment_disease=DOID:17!1.20e-12!5;DOID:450!1.20e-12!5;DOID:66!1.20e-12!5;DOID:423!1.20e-12!5;DOID:0080000!1.20e-12!5;DOID:11722!1.20e-12!5 | |||
|ontology_enrichment_disease_v019=DOID:1192;1.15e-12;3!DOID:3369;1.98e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1192,1.05e-12,3;DOID:3369,1.98e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.52e-17!6;UBERON:0002358!5.52e-17!6;UBERON:0003684!5.52e-17!6;UBERON:0001178!5.52e-17!6;UBERON:0004457!1.52e-10!12;UBERON:0000042!1.52e-10!12;UBERON:0002097!5.51e-08!40;UBERON:0000310!4.88e-07!10;UBERON:0002199!8.90e-07!45;UBERON:0002416!8.90e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.58e-37;6!UBERON:0002358;7.58e-37;6!UBERON:0003684;7.58e-37;6!UBERON:0001178;7.58e-37;6!UBERON:0004457;1.45e-24;9!UBERON:0000042;1.45e-24;9!UBERON:0000310;4.57e-22;10!UBERON:0001443;4.69e-20;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.31e-37,6;UBERON:0002358,7.31e-37,6;UBERON:0003684,7.31e-37,6;UBERON:0001178,7.31e-37,6;UBERON:0000310,3.92e-22,10;UBERON:0001443,4.09e-20,11;UBERON:0004457,2.04e-18,12;UBERON:0000042,2.04e-18,12 | |||
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|phase1_expression=4.54195948176392,1.49870366723688,7.61153782118244,2.00146596706261,0.893922188854576,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44852317882041,0.379891534993739,0.264818361626438,0.573673241497627,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0.113432183160021,2.15267562826634,0.427114777637135,0.211931901159562,0.300091096084402,0.206105058476878,0.772921620136887,1.11670113798954,0.675105328965065,1.07180705677318,0.504867548488229,0.184099797284599,0,1.77504796258307,0.705264687593482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,1.17587489739202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.579125226670317,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8713309316768,5.52463103837025,5.89386198309454,19.4771506868665,3.58195074346692,2.2519548960105,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09883357782012,2.0627374980147,0,0,0,0,0,0,0.275673144969061,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07001315444375,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0.800055529326307,0.343395705182793,0.336749488765919,0,0,0,0.260994291965212,0,0,0.734210113519403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05105676373734,0,0.198916222116275,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,1.23345048838675,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p14@RBMS3 | |||
}} | }} |
Latest revision as of 21:58, 17 September 2015
Short description: | p14@RBMS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RBMS3_5end |
Coexpression cluster: | C4323_Preadipocyte_Ewing_Adipocyte_rectum_Fibroblast_basal_osteoclastoma |
Association with transcript: | 42bp_to_ENST00000478716_5end |
EntrezGene: | RBMS3 |
HGNC: | 13427 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.34e-27 | 3 |
omentum preadipocyte | 2.28e-27 | 3 |
preadipocyte | 2.01e-26 | 12 |
adipocyte of breast | 1.71e-18 | 2 |
adipocyte of omentum tissue | 8.84e-13 | 3 |
fibroblast | 5.28e-10 | 76 |
fat cell | 1.32e-09 | 15 |
osteoblast | 1.25e-07 | 11 |
osteoprogenitor cell | 1.25e-07 | 11 |
mesenchyme condensation cell | 1.25e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.31e-37 | 6 |
peritoneum | 7.31e-37 | 6 |
abdominal cavity | 7.31e-37 | 6 |
visceral peritoneum | 7.31e-37 | 6 |
breast | 3.92e-22 | 10 |
chest | 4.09e-20 | 11 |
cavity lining | 2.04e-18 | 12 |
serous membrane | 2.04e-18 | 12 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system neoplasm | 1.05e-12 | 3 |
peripheral primitive neuroectodermal tumor | 1.98e-10 | 1 |