FFCP PHASE1:Hg19::chr3:259245..259270,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:259245..259270,+
|short_description=p19@CHL1
|description=CAGE_peak_19_at_CHL1_5end
|association_with_transcript=27bp_to_ENST00000449294_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10752 | |EntrezGene=10752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1939 | |HGNC=1939 | ||
|TSSclassifier=strong | |||
|UniProt=C9JH37 | |UniProt=C9JH37 | ||
|association_with_transcript=27bp_to_ENST00000449294_5end | |||
|cluster_id=chr3:259245..259270,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_19_at_CHL1_5end | |||
|id=chr3:259245..259270,+ | |||
|ontology_enrichment_celltype=CL:0000167!2.67e-07!1;CL:0000164!2.67e-07!1;CL:0000502!2.67e-07!1;CL:0000172!2.67e-07!1;CL:0000173!2.67e-07!1;CL:0002351!2.67e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.37e-99;1 | |||
|ontology_enrichment_disease=DOID:4430!2.67e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003127;4.52e-50;2!UBERON:0001043;4.27e-34;3!UBERON:0003126;1.91e-15;7!UBERON:0001005;1.91e-15;7!UBERON:0005178;3.95e-11;34!UBERON:0002224;3.95e-11;34!UBERON:0005181;1.63e-10;35!UBERON:0001041;1.86e-08;14!UBERON:0007196;5.93e-08;15!UBERON:0001558;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,4.52e-50,2;UBERON:0001043,4.27e-34,3;UBERON:0009143,4.27e-34,3;UBERON:0003126,1.91e-15,7;UBERON:0001005,1.91e-15,7;UBERON:0005178,6.62e-13,34;UBERON:0002224,6.62e-13,34;UBERON:0005181,1.42e-12,35;UBERON:0000915,6.99e-09,52;UBERON:0007196,5.93e-08,15;UBERON:0001558,5.93e-08,15 | |||
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|short_description=p19@CHL1 | |||
}} | }} |
Latest revision as of 20:50, 17 September 2015
Short description: | p19@CHL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_CHL1_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 27bp_to_ENST00000449294_5end |
EntrezGene: | CHL1 |
HGNC: | 1939 |
UniProt: | C9JH37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 4.52e-50 | 2 |
esophagus | 4.27e-34 | 3 |
esophageal region | 4.27e-34 | 3 |
trachea | 1.91e-15 | 7 |
respiratory airway | 1.91e-15 | 7 |
thoracic cavity element | 6.62e-13 | 34 |
thoracic cavity | 6.62e-13 | 34 |
thoracic segment organ | 1.42e-12 | 35 |
thoracic segment of trunk | 6.99e-09 | 52 |
tracheobronchial tree | 5.93e-08 | 15 |
lower respiratory tract | 5.93e-08 | 15 |