FFCP PHASE1:Hg19::chr3:25600038..25600047,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:25600038..25600047,+
|short_description=p@chr3:25600038..25600047,+
|description=CAGE_peak_at_chr3:25600038..25600047,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:25600038..25600047,+ | |||
|description=CAGE_peak_at_chr3:25600038..25600047,+ | |||
|id=chr3:25600038..25600047,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;4.83e-13;3!CL:0000067;4.83e-13;3!CL:0005012;4.83e-13;3!CL:0002304;4.83e-13;3!CL:0002581;2.07e-10;1!CL:0000710;1.90e-07;20!CL:0000540;5.92e-07;6!CL:0000404;5.92e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,4.56e-13,3;CL:0000067,4.56e-13,3;CL:0005012,4.56e-13,3;CL:0002304,4.56e-13,3;CL:0002581,2.08e-10,1;CL:0000133,1.39e-08,59;CL:0000710,1.81e-07,20;CL:0000540,4.39e-07,6;CL:0000031,4.39e-07,6;CL:0000404,4.39e-07,6;CL:0000221,6.74e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.07e-10;1!CL:0000031;5.92e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;7.74e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,8.14e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000477!7.85e-10!286;UBERON:0007023!1.84e-09!115;UBERON:0003075!4.43e-09!86;UBERON:0007284!4.43e-09!86;UBERON:0000483!4.83e-09!309;UBERON:0003056!7.42e-09!61;UBERON:0002346!8.83e-09!90;UBERON:0000119!1.03e-08!312;UBERON:0000073!1.28e-07!94;UBERON:0001016!1.28e-07!94;UBERON:0005743!3.75e-07!86;UBERON:0002616!5.23e-07!59;UBERON:0000481!6.06e-07!347;UBERON:0004111!6.87e-07!241;UBERON:0000955!9.21e-07!69;UBERON:0006238!9.21e-07!69;UBERON:0001017!9.84e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;4.83e-13;3!UBERON:0001775;4.83e-13;3!UBERON:0002079;2.07e-10;1!UBERON:0001000;2.07e-10;1!UBERON:0002135;2.07e-10;1!UBERON:0005352;2.07e-10;1!UBERON:0000488;5.20e-10;4!UBERON:0002203;5.92e-07;6!UBERON:0001768;5.92e-07;6!UBERON:0002200;5.92e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,4.56e-13,3;UBERON:0001775,4.56e-13,3;UBERON:0001000,1.43e-10,1;UBERON:0005352,1.43e-10,1;UBERON:0002079,2.28e-10,1;UBERON:0002135,2.74e-10,1;UBERON:0000488,4.98e-10,4;UBERON:0002203,5.75e-07,6;UBERON:0001768,5.75e-07,6;UBERON:0002200,5.75e-07,6 | |||
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| ||
|short_description=p@chr3:25600038..25600047,+ | |||
}} | }} |
Latest revision as of 20:14, 29 July 2015
Short description: | p@chr3:25600038..25600047, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:25600038..25600047, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 4.56e-13 | 3 |
ciliated epithelial cell | 4.56e-13 | 3 |
multi-ciliated epithelial cell | 4.56e-13 | 3 |
non-pigmented ciliary epithelial cell | 4.56e-13 | 3 |
perirenal preadipocyte | 2.08e-10 | 1 |
neurectodermal cell | 1.39e-08 | 59 |
neurecto-epithelial cell | 1.81e-07 | 20 |
neuron | 4.39e-07 | 6 |
neuroblast | 4.39e-07 | 6 |
electrically signaling cell | 4.39e-07 | 6 |
ectodermal cell | 6.74e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 4.56e-13 | 3 |
ciliary body | 4.56e-13 | 3 |
vas deferens | 1.43e-10 | 1 |
spermatic cord | 1.43e-10 | 1 |
left cardiac atrium | 2.28e-10 | 1 |
mitral valve | 2.74e-10 | 1 |
atypical epithelium | 4.98e-10 | 4 |
vasculature of eye | 5.75e-07 | 6 |
uvea | 5.75e-07 | 6 |
vasculature of head | 5.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 8.14e-11 | 1 |