FFCP PHASE1:Hg19::chr3:197024871..197024904,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:197024871..197024904,-
|short_description=p5@DLG1
|description=CAGE_peak_5_at_DLG1_5end
|association_with_transcript=81bp_to_ENST00000392381,uc003fxp.2_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1739 | |EntrezGene=1739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2900 | |HGNC=2900 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQD7 | |UniProt=E7EQD7 | ||
|association_with_transcript=81bp_to_ENST00000392381,uc003fxp.2_5end | |||
|cluster_id=chr3:197024871..197024904,- | |||
|description=CAGE_peak_5_at_DLG1_5end | |||
|id=chr3:197024871..197024904,- | |||
|ontology_enrichment_celltype=CL:0000076!1.56e-09!62 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,3.75e-09,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.86e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.09e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.36e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000033!2.29e-12!123;UBERON:0000153!2.38e-12!129;UBERON:0007811!2.38e-12!129;UBERON:0000955!3.60e-12!69;UBERON:0006238!3.60e-12!69;UBERON:0001049!4.81e-12!57;UBERON:0005068!4.81e-12!57;UBERON:0006241!4.81e-12!57;UBERON:0007135!4.81e-12!57;UBERON:0000073!7.34e-12!94;UBERON:0001016!7.34e-12!94;UBERON:0002616!1.51e-11!59;UBERON:0005743!3.25e-11!86;UBERON:0003075!1.10e-10!86;UBERON:0007284!1.10e-10!86;UBERON:0002346!3.15e-10!90;UBERON:0001017!4.78e-10!82;UBERON:0003056!7.08e-10!61;UBERON:0002780!9.74e-10!41;UBERON:0001890!9.74e-10!41;UBERON:0006240!9.74e-10!41;UBERON:0003080!1.15e-09!42;UBERON:0001893!1.95e-09!34;UBERON:0004121!2.55e-09!169;UBERON:0002020!2.77e-09!34;UBERON:0003528!2.77e-09!34;UBERON:0000924!4.12e-09!173;UBERON:0006601!4.12e-09!173;UBERON:0002791!5.60e-09!33;UBERON:0001869!2.28e-08!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.92e-08;34!UBERON:0003528;4.64e-08;34!UBERON:0002020;4.64e-08;34!UBERON:0002780;6.22e-08;41!UBERON:0001890;6.22e-08;41!UBERON:0002791;7.26e-08;32!UBERON:0001869;8.87e-08;32!UBERON:0000073;1.86e-07;53!UBERON:0002616;1.86e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,8.49e-13,82;UBERON:0007284,8.49e-13,82;UBERON:0000955,1.81e-12,68;UBERON:0006238,1.81e-12,68;UBERON:0001049,1.87e-12,56;UBERON:0005068,1.87e-12,56;UBERON:0006241,1.87e-12,56;UBERON:0007135,1.87e-12,56;UBERON:0010371,2.60e-12,104;UBERON:0002346,3.24e-12,86;UBERON:0000073,2.07e-11,53;UBERON:0002616,2.07e-11,53;UBERON:0003056,7.79e-11,61;UBERON:0001016,2.02e-10,89;UBERON:0001017,5.17e-10,81;UBERON:0002780,6.42e-10,41;UBERON:0001890,6.42e-10,41;UBERON:0003080,6.42e-10,41;UBERON:0006240,6.42e-10,41;UBERON:0001893,9.29e-10,34;UBERON:0003528,1.35e-09,34;UBERON:0002020,1.35e-09,34;UBERON:0002791,1.10e-08,32;UBERON:0001869,1.28e-08,32;UBERON:0004121,2.09e-08,171;UBERON:0000924,2.09e-08,171;UBERON:0006601,2.09e-08,171;UBERON:0010314,3.13e-07,132 | |||
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| ||
|short_description=p5@DLG1 | |||
}} | }} |
Latest revision as of 16:52, 17 September 2015
Short description: | p5@DLG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DLG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_ENST00000392381, uc003fxp.2_5end |
EntrezGene: | DLG1 |
HGNC: | 2900 |
UniProt: | E7EQD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 3.75e-09 | 63 |
Ontology term | p-value | n |
---|---|---|
neural plate | 8.49e-13 | 82 |
presumptive neural plate | 8.49e-13 | 82 |
brain | 1.81e-12 | 68 |
future brain | 1.81e-12 | 68 |
neural tube | 1.87e-12 | 56 |
neural rod | 1.87e-12 | 56 |
future spinal cord | 1.87e-12 | 56 |
neural keel | 1.87e-12 | 56 |
ecto-epithelium | 2.60e-12 | 104 |
neurectoderm | 3.24e-12 | 86 |
regional part of nervous system | 2.07e-11 | 53 |
regional part of brain | 2.07e-11 | 53 |
pre-chordal neural plate | 7.79e-11 | 61 |
nervous system | 2.02e-10 | 89 |
central nervous system | 5.17e-10 | 81 |
regional part of forebrain | 6.42e-10 | 41 |
forebrain | 6.42e-10 | 41 |
anterior neural tube | 6.42e-10 | 41 |
future forebrain | 6.42e-10 | 41 |
telencephalon | 9.29e-10 | 34 |
brain grey matter | 1.35e-09 | 34 |
gray matter | 1.35e-09 | 34 |
regional part of telencephalon | 1.10e-08 | 32 |
cerebral hemisphere | 1.28e-08 | 32 |
ectoderm-derived structure | 2.09e-08 | 171 |
ectoderm | 2.09e-08 | 171 |
presumptive ectoderm | 2.09e-08 | 171 |
structure with developmental contribution from neural crest | 3.13e-07 | 132 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.36e-07 | 14 |