FFCP PHASE1:Hg19::chr3:188302186..188302202,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:188302186..188302202,+
|short_description=p21@LPP
|description=CAGE_peak_21_at_LPP_5end
|association_with_transcript=51bp_to_ENST00000487347_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4026 | |EntrezGene=4026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6679 | |HGNC=6679 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=51bp_to_ENST00000487347_5end | |||
|cluster_id=chr3:188302186..188302202,+ | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_21_at_LPP_5end | |||
|id=chr3:188302186..188302202,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.59e-25!42;CL:0000860!3.61e-22!45;CL:0002009!2.34e-21!65;CL:0002194!2.74e-21!63;CL:0000576!2.74e-21!63;CL:0000040!2.74e-21!63;CL:0000559!2.74e-21!63;CL:0000557!3.73e-18!71;CL:0000839!1.53e-17!70;CL:0000766!6.25e-15!76;CL:0000763!6.64e-09!112;CL:0000049!6.64e-09!112;CL:0002087!1.59e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.68e-35;33!CL:0002057;1.68e-35;33!CL:0000473;2.13e-35;39!CL:0000234;2.13e-35;39!CL:0000576;2.95e-21;48!CL:0000766;9.14e-17;69!CL:0000840;3.56e-09;5!CL:0000235;1.55e-08;6!CL:0002393;2.77e-08;6!CL:0002397;2.77e-08;6!CL:0000763;2.91e-08;100!CL:0002573;3.19e-08;2!CL:0002087;2.12e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,9.75e-51,59;CL:0000576,9.75e-51,59;CL:0000040,9.75e-51,59;CL:0000559,9.75e-51,59;CL:0000473,5.11e-49,48;CL:0000234,5.11e-49,48;CL:0002009,6.32e-49,61;CL:0000839,7.20e-45,66;CL:0000557,3.96e-44,67;CL:0000860,1.19e-41,42;CL:0002057,1.19e-41,42;CL:0000766,9.83e-41,72;CL:0000763,1.78e-25,108;CL:0000049,1.78e-25,108;CL:0002087,1.31e-23,115;CL:0002031,2.08e-22,120;CL:0000738,3.75e-19,136;CL:0002032,2.35e-15,161;CL:0000837,2.35e-15,161;CL:0000037,1.70e-14,168;CL:0000988,1.73e-13,177;CL:0000840,3.57e-09,5;CL:0001029,3.57e-09,5;CL:0000235,1.15e-08,6;CL:0002573,3.19e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-32;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.12e-20!102;UBERON:0003061!3.12e-20!102;UBERON:0002193!6.43e-18!112;UBERON:0002371!3.64e-16!80;UBERON:0001474!6.48e-14!86;UBERON:0002405!1.04e-11!115;UBERON:0004765!1.20e-11!101;UBERON:0001434!1.20e-11!101;UBERON:0002204!2.92e-10!167;UBERON:0003081!4.06e-10!216;UBERON:0000467!1.96e-08!625;UBERON:0000480!2.42e-08!626;UBERON:0000468!7.73e-08!659;UBERON:0000923!9.00e-08!604;UBERON:0005291!9.00e-08!604;UBERON:0006598!9.00e-08!604;UBERON:0002532!9.00e-08!604;UBERON:0002050!1.11e-07!605;UBERON:0005423!1.11e-07!605;UBERON:0000922!2.05e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.46e-38,76;UBERON:0001474,3.61e-35,82;UBERON:0002390,9.67e-34,98;UBERON:0003061,9.67e-34,98;UBERON:0004765,1.35e-31,90;UBERON:0002405,2.05e-30,93;UBERON:0002193,4.08e-30,108;UBERON:0001434,6.29e-28,100;UBERON:0002204,4.20e-16,167;UBERON:0003081,1.12e-14,203;UBERON:0000926,4.81e-09,315;UBERON:0004120,4.81e-09,315;UBERON:0006603,4.81e-09,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,1.66198622559563,1.60435557976113,1.08505435357926,0,0,0,0.145398238779565,0,0,1.85943229524548,0.822335776043652,2.16794459626573,1.1507695692886,1.0246428261164,3.54723344832878,3.10271112662957,0.645484683583826,1.35426486594342,0.188242339542605,0,0.898893937780338,0.918251677112708,4.49300637906531,3.19668562899521,0,0.398927315243264,0.426224750532694,2.61188314765726,2.26954089876456,1.24564449799115,0.75374599577023,0.521482918420201,1.52032191293582,1.81619850790011,4.78760926783834,4.1140110367315,0.422510572623884,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,14.2800853208061,13.5821195093428,7.04677190749985,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.825354125820202,0,0,0,0,0,0,0,0,0,1.42879565254528,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.264818361626438,0,0,0,0,0,0.311211035399766,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0.831192346452549,0.438977620880838,0,0,0.113432183160021,0.358779271377724,0,0,0.900273288253207,0.412210116953756,0,0,0.506328996723799,0,0,0.0920498986422993,0.161646056818812,0,0,0.169560592310488,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.109750285408626,0,0,1.29623823221941,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,1.47730203652438,4.21207677250628,1.78357394746474,0,0.16798212819886,0,0.895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0.716243852959582,0,0.197030760201927,0.215627574859517,0,0.508189248444927,0,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.213455115606889,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0,0.328508624055237,0,0,0,0,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,1.30012049207304,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.178064071293475,0.330569830721956,0,1.14851441245126,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.636406495851874,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.48111056362756,0,1.08890984861323,0,0,0,0,0,1.01489521846434,0,0,0,1.23408681925858,0,0.540031437238115,0.79312517629427,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0.842391534340376,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.617819694732514,0.626531697032732,0.067401132980677,0.802577647298789,0,0,0.19566461893209,0,0,0,0,1.0741718536843,0.150323419414493,0,0,0,0,0,0,0,0,0.587954384486266,0.0870592065804026,0.17472666824203,0,0,0,0,0.290967049465258,0,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0.271808412147228,0.627617077873999,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0,0.558564802544508,0.458320848023367,0.717873024576814,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0.449947783103001,0,0,0.670869375198532,0,0.0524545881349981,0,0.717149357331379,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0,2.55336503108073,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0.675769762612291,0,0.690860683462397,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0.39997479170986,0,0,0,0,0.279759015438889,0,0,0,0.157265941855896,0,0,0.850299680406731,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.196295437002051,0.235939446695481,0.183428598521679,0,0.381382095467167,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0.175871244359621,0.127762427639595,0,0,0.606965604236632,0,0.0887023701626388,0,0,0.0679697329768317,0,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| ||
|short_description=p21@LPP | |||
}} | }} |
Latest revision as of 08:15, 17 September 2015
Short description: | p21@LPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_LPP_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 51bp_to_ENST00000487347_5end |
EntrezGene: | LPP |
HGNC: | 6679 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 9.75e-51 | 59 |
monocyte | 9.75e-51 | 59 |
monoblast | 9.75e-51 | 59 |
promonocyte | 9.75e-51 | 59 |
defensive cell | 5.11e-49 | 48 |
phagocyte | 5.11e-49 | 48 |
macrophage dendritic cell progenitor | 6.32e-49 | 61 |
myeloid lineage restricted progenitor cell | 7.20e-45 | 66 |
granulocyte monocyte progenitor cell | 3.96e-44 | 67 |
classical monocyte | 1.19e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-41 | 42 |
myeloid leukocyte | 9.83e-41 | 72 |
myeloid cell | 1.78e-25 | 108 |
common myeloid progenitor | 1.78e-25 | 108 |
nongranular leukocyte | 1.31e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 2.08e-22 | 120 |
leukocyte | 3.75e-19 | 136 |
hematopoietic oligopotent progenitor cell | 2.35e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.35e-15 | 161 |
hematopoietic stem cell | 1.70e-14 | 168 |
hematopoietic cell | 1.73e-13 | 177 |
immature conventional dendritic cell | 3.57e-09 | 5 |
common dendritic progenitor | 3.57e-09 | 5 |
macrophage | 1.15e-08 | 6 |
Schwann cell | 3.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.46e-38 | 76 |
bone element | 3.61e-35 | 82 |
hematopoietic system | 9.67e-34 | 98 |
blood island | 9.67e-34 | 98 |
skeletal element | 1.35e-31 | 90 |
immune system | 2.05e-30 | 93 |
hemolymphoid system | 4.08e-30 | 108 |
skeletal system | 6.29e-28 | 100 |
musculoskeletal system | 4.20e-16 | 167 |
lateral plate mesoderm | 1.12e-14 | 203 |
mesoderm | 4.81e-09 | 315 |
mesoderm-derived structure | 4.81e-09 | 315 |
presumptive mesoderm | 4.81e-09 | 315 |