FFCP PHASE1:Hg19::chr3:186739681..186739693,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:186739681..186739693,+
|short_description=p7@ST6GAL1
|description=CAGE_peak_7_at_ST6GAL1_5end
|association_with_transcript=16bp_to_NM_003032,uc003frd.2_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6480 | |EntrezGene=6480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10860 | |HGNC=10860 | ||
|TSSclassifier=strong | |||
|UniProt=P15907 | |UniProt=P15907 | ||
|association_with_transcript=16bp_to_NM_003032,uc003frd.2_5end | |||
|cluster_id=chr3:186739681..186739693,+ | |||
|coexpression_cluster_id=C995 | |||
|description=CAGE_peak_7_at_ST6GAL1_5end | |||
|id=chr3:186739681..186739693,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.37e-37!24;CL:0000826!2.37e-37!24;CL:0000236!4.02e-24!14;CL:0000542!2.70e-15!53;CL:0000051!2.70e-15!53;CL:0000838!3.03e-14!52;CL:0002087!6.53e-12!119;CL:0000738!1.53e-10!140;CL:0002031!6.81e-09!124;CL:0000037!3.69e-08!172;CL:0000566!3.69e-08!172;CL:0000988!4.12e-07!182;CL:0002032!8.08e-07!165;CL:0000837!8.08e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.52e-83;24!CL:0000236;2.18e-49;13!CL:0000542;1.55e-24;53!CL:0002087;1.60e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.93e-83,24;CL:0000826,3.93e-83,24;CL:0000236,5.40e-54,14;CL:0000542,2.02e-38,53;CL:0000051,2.02e-38,53;CL:0000838,1.25e-35,52;CL:0002087,3.78e-25,115;CL:0002031,6.32e-22,120;CL:0000738,2.64e-20,136;CL:0002032,3.50e-16,161;CL:0000837,3.50e-16,161;CL:0000037,3.01e-15,168;CL:0000988,3.73e-14,177;CL:0000785,8.55e-11,2;CL:0000955,8.55e-11,2;CL:0000818,8.55e-11,2;CL:0000954,8.55e-11,2;CL:0000816,8.55e-11,2;CL:0000817,1.84e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.55e-24;53!CL:0000954;9.86e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.42e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.27e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.12e-36!115;UBERON:0002780!1.40e-14!41;UBERON:0001890!1.40e-14!41;UBERON:0006240!1.40e-14!41;UBERON:0001049!3.50e-14!57;UBERON:0005068!3.50e-14!57;UBERON:0006241!3.50e-14!57;UBERON:0007135!3.50e-14!57;UBERON:0003080!4.39e-14!42;UBERON:0001893!9.58e-14!34;UBERON:0002791!6.36e-13!33;UBERON:0002020!4.09e-12!34;UBERON:0003528!4.09e-12!34;UBERON:0001869!8.06e-12!32;UBERON:0002616!3.23e-11!59;UBERON:0000955!3.52e-10!69;UBERON:0006238!3.52e-10!69;UBERON:0002619!7.50e-10!22;UBERON:0001017!9.35e-10!82;UBERON:0005743!1.17e-09!86;UBERON:0001950!1.87e-09!20;UBERON:0000178!3.29e-09!15;UBERON:0000179!3.29e-09!15;UBERON:0000463!3.29e-09!15;UBERON:0003056!1.24e-08!61;UBERON:0000956!2.52e-08!25;UBERON:0000203!2.52e-08!25;UBERON:0003075!2.79e-08!86;UBERON:0007284!2.79e-08!86;UBERON:0000073!5.07e-08!94;UBERON:0001016!5.07e-08!94;UBERON:0002346!1.35e-07!90;UBERON:0000153!3.47e-07!129;UBERON:0007811!3.47e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.85e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.04e-07,3;UBERON:0004854,3.04e-07,3;UBERON:0009034,3.04e-07,3;UBERON:0002095,3.04e-07,3;UBERON:0004782,3.04e-07,3;UBERON:0003281,3.04e-07,3;UBERON:0009664,3.04e-07,3;UBERON:0002296,3.04e-07,3;UBERON:0005602,3.04e-07,3;UBERON:0001179,3.04e-07,3;UBERON:0006293,3.04e-07,3 | |||
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| ||
|short_description=p7@ST6GAL1 | |||
}} | }} |
Latest revision as of 06:03, 17 September 2015
Short description: | p7@ST6GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ST6GAL1_5end |
Coexpression cluster: | C995_B_plasma_lymphoma_xeroderma_acute_Burkitt_b |
Association with transcript: | 16bp_to_NM_003032, uc003frd.2_5end |
EntrezGene: | ST6GAL1 |
HGNC: | 10860 |
UniProt: | P15907 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.93e-83 | 24 |
pro-B cell | 3.93e-83 | 24 |
B cell | 5.40e-54 | 14 |
lymphocyte | 2.02e-38 | 53 |
common lymphoid progenitor | 2.02e-38 | 53 |
lymphoid lineage restricted progenitor cell | 1.25e-35 | 52 |
nongranular leukocyte | 3.78e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 6.32e-22 | 120 |
leukocyte | 2.64e-20 | 136 |
hematopoietic oligopotent progenitor cell | 3.50e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.50e-16 | 161 |
hematopoietic stem cell | 3.01e-15 | 168 |
hematopoietic cell | 3.73e-14 | 177 |
mature B cell | 8.55e-11 | 2 |
pre-B-II cell | 8.55e-11 | 2 |
transitional stage B cell | 8.55e-11 | 2 |
small pre-B-II cell | 8.55e-11 | 2 |
immature B cell | 8.55e-11 | 2 |
precursor B cell | 1.84e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.04e-07 | 3 |
gastrointestinal system mesentery | 3.04e-07 | 3 |
stomach region | 3.04e-07 | 3 |
mesentery | 3.04e-07 | 3 |
gastrointestinal system serosa | 3.04e-07 | 3 |
mesentery of stomach | 3.04e-07 | 3 |
gut mesentery | 3.04e-07 | 3 |
dorsal mesentery | 3.04e-07 | 3 |
dorsal mesogastrium | 3.04e-07 | 3 |
peritoneal cavity | 3.04e-07 | 3 |
spleen primordium | 3.04e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.27e-08 | 10 |