FFCP PHASE1:Hg19::chr3:178276632..178276655,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:178276632..178276655,+
|short_description=p1@KCNMB2
|description=CAGE_peak_1_at_KCNMB2_5end
|association_with_transcript=14bp_to_ENST00000455865,NM_005832,...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10242 | |EntrezGene=10242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6286 | |HGNC=6286 | ||
|TSSclassifier=strong | |||
|UniProt=E7EM81,Q9Y691 | |UniProt=E7EM81,Q9Y691 | ||
|association_with_transcript=14bp_to_ENST00000455865,NM_005832,uc003fje.2,uc003fjf.2_5end | |||
|cluster_id=chr3:178276632..178276655,+ | |||
|description=CAGE_peak_1_at_KCNMB2_5end | |||
|id=chr3:178276632..178276655,+ | |||
|ontology_enrichment_celltype=CL:0000785!7.13e-08!2;CL:0000955!7.13e-08!2;CL:0000818!7.13e-08!2;CL:0000954!7.13e-08!2;CL:0000816!7.13e-08!2;CL:0000242!8.11e-08!2;CL:0000945!6.83e-07!24;CL:0000826!6.83e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.43e-16;2!CL:0000242;1.43e-16;2!CL:0000785;3.06e-09;1!CL:0000819;3.06e-09;1!CL:0000946;3.58e-09;1!CL:0000786;3.58e-09;1!CL:0000312;3.83e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000785,1.09e-16,2;CL:0000955,1.09e-16,2;CL:0000818,1.09e-16,2;CL:0000954,1.09e-16,2;CL:0000816,1.09e-16,2;CL:0000242,1.48e-16,2;CL:0000817,1.97e-11,3;CL:0000819,3.06e-09,1;CL:0000946,3.58e-09,1;CL:0000786,3.58e-09,1;CL:0000980,3.58e-09,1;CL:0000312,3.89e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000954;1.09e-16;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.06e-09;1!DOID:8675;3.06e-09;1!DOID:630;6.65e-09;1!DOID:0050177;6.65e-09;1!DOID:0050427;6.65e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.06e-09,1;DOID:8675,3.06e-09,1;DOID:630,6.65e-09,1;DOID:0050177,6.65e-09,1;DOID:0050427,6.65e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-13!115;UBERON:0003127!4.39e-07!2;UBERON:0003135!6.41e-07!11;UBERON:0000341!6.49e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.32e-11;3!UBERON:0004054;4.32e-11;3!UBERON:0001301;3.87e-09;1!UBERON:0001000;9.37e-09;1!UBERON:0005352;9.37e-09;1!UBERON:0002171;1.42e-08;1!UBERON:0006518;1.42e-08;1!UBERON:0008949;1.42e-08;1!UBERON:0000101;1.42e-08;1!UBERON:0002167;1.42e-08;1!UBERON:0005904;1.56e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.43e-11,3;UBERON:0004054,4.43e-11,3;UBERON:0001301,3.87e-09,1;UBERON:0001000,9.74e-09,1;UBERON:0005352,9.74e-09,1;UBERON:0002171,1.42e-08,1;UBERON:0006518,1.42e-08,1;UBERON:0008949,1.42e-08,1;UBERON:0000101,1.42e-08,1;UBERON:0002167,1.42e-08,1;UBERON:0005904,1.59e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,21.1623508197592,0,12.5546501570291,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,5.8606373451049,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,117.500884254889,0,0,4.73501283419269,10.8891644443797,0,0,0,0,0,0,0,0,0,0,0,0,0,30.2277136058712,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,7.72177490378841,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0,0,0,0,0,0,0,0,3.86147965766071,23.8143830132891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17466153824464,1.25763444079733,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,88.5152971975006,23.4772066349537,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,4.73825068600321,0,3.90757005616546,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,32.2655165156182,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0.198950775161368,0,0,0,2.56636834063345,0.231522474323834,0.874238242015829,5.64380755633827,0,0,0,0,0,0,0,0,0.89947040332436,0,0,0,0,0,0.143339583151451,0,0,0,10.580536810308,0,0,0,0,0,0,0,0,0,0,1.97024615367422,0.803892390468535,0,0,0.213233981900981,2.14257988317366,0,0,0.560659312903067,2.10035622317944,1.61693751166575,0,0,0,2.79716601031438,0.332660356546013,0,0,0,0,0,0.611207220914332,0,0,0,8.33478079988406 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,21.1623508197592,0,12.5546501570291,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,5.8606373451049,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,117.500884254889,0,0,4.73501283419269,10.8891644443797,0,0,0,0,0,0,0,0,0,0,0,0,0,30.2277136058712,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,7.72177490378841,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.592713324460491,0,0,0,0,0,0,0,0,0,3.86147965766071,23.8143830132891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17466153824464,1.25763444079733,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,88.5152971975006,23.4772066349537,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0.80057074828547,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,4.73825068600321,0,3.90757005616546,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,32.2655165156182,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0.198950775161368,0,0,0,2.56636834063345,0.231522474323834,0.874238242015829,5.64380755633827,0,0,0,0,0,0,0,0,0.89947040332436,0,0,0,0,0,0.143339583151451,0,0,0,10.580536810308,0,0,0,0,0,0,0,0,0,0,1.97024615367422,0.803892390468535,0,0,0.213233981900981,2.14257988317366,0,0,0.560659312903067,2.10035622317944,1.61693751166575,0,0,0,2.79716601031438,0.332660356546013,0,0,0,0,0,0.611207220914332,0,0,0,8.33478079988406 | ||
|short_description=p1@KCNMB2 | |||
}} | }} |
Latest revision as of 20:28, 16 September 2015
Short description: | p1@KCNMB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNMB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENST00000455865, NM_005832, uc003fje.2, uc003fjf.2_5end |
EntrezGene: | KCNMB2 |
HGNC: | 6286 |
UniProt: | E7EM81Q9Y691 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature B cell | 1.09e-16 | 2 |
pre-B-II cell | 1.09e-16 | 2 |
transitional stage B cell | 1.09e-16 | 2 |
small pre-B-II cell | 1.09e-16 | 2 |
immature B cell | 1.09e-16 | 2 |
Merkel cell | 1.48e-16 | 2 |
precursor B cell | 1.97e-11 | 3 |
B-1 B cell | 3.06e-09 | 1 |
antibody secreting cell | 3.58e-09 | 1 |
plasma cell | 3.58e-09 | 1 |
plasmablast | 3.58e-09 | 1 |
keratinocyte | 3.89e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 4.43e-11 | 3 |
internal male genitalia | 4.43e-11 | 3 |
epididymis | 3.87e-09 | 1 |
vas deferens | 9.74e-09 | 1 |
spermatic cord | 9.74e-09 | 1 |
lower lobe of right lung | 1.42e-08 | 1 |
right lung lobe | 1.42e-08 | 1 |
lower lobe of lung | 1.42e-08 | 1 |
lobe of lung | 1.42e-08 | 1 |
right lung | 1.42e-08 | 1 |
duct of male reproductive system | 1.59e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.06e-09 | 1 |
lymphosarcoma | 3.06e-09 | 1 |
genetic disease | 6.65e-09 | 1 |
monogenic disease | 6.65e-09 | 1 |
xeroderma pigmentosum | 6.65e-09 | 1 |