FFCP PHASE1:Hg19::chr3:170415945..170415962,+: Difference between revisions
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|id=chr3:170415945..170415962,+
|short_description=p@chr3:170415945..170415962,+
|description=CAGE_peak_at_chr3:170415945..170415962,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:170415945..170415962,+ | |||
|description=CAGE_peak_at_chr3:170415945..170415962,+ | |||
|id=chr3:170415945..170415962,+ | |||
|ontology_enrichment_celltype=CL:1000306!7.64e-10!4;CL:0002547!7.64e-10!4;CL:0000569!3.59e-09!4;CL:0000011!3.59e-09!4;CL:0002589!8.31e-09!2;CL:0002595!1.96e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:1000306;4.29e-19;4!CL:0002547;4.29e-19;4!CL:0002575;1.64e-10;2!CL:0002589;2.07e-10;2!CL:0002539;4.50e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,3.92e-19,4;CL:0002547,3.92e-19,4;CL:0002575,1.72e-10,2;CL:0002589,2.27e-10,2;CL:0002539,4.34e-08,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!8.66e-11!42;UBERON:0003509!8.66e-11!42;UBERON:0004572!8.66e-11!42;UBERON:0004573!4.81e-10!33;UBERON:0004571!4.81e-10!33;UBERON:0000415!7.64e-10!4;UBERON:0007240!7.64e-10!4;UBERON:0005742!7.64e-10!4;UBERON:0005734!7.64e-10!4;UBERON:0004664!7.64e-10!4;UBERON:0004663!7.64e-10!4;UBERON:0001529!8.31e-09!2;UBERON:0007204!8.31e-09!2;UBERON:0004872!4.52e-08!84;UBERON:0004535!5.10e-08!110;UBERON:0001009!1.08e-07!113;UBERON:0000025!1.63e-07!194;UBERON:0002049!1.74e-07!79;UBERON:0007798!1.74e-07!79;UBERON:0003834!1.96e-07!5;UBERON:0001533!1.96e-07!5;UBERON:0000119!4.48e-07!312;UBERON:0001981!8.45e-07!60;UBERON:0007500!8.45e-07!60;UBERON:0004537!8.45e-07!60;UBERON:0006965!8.45e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;4.29e-19;4!UBERON:0000415;4.29e-19;4!UBERON:0007240;4.29e-19;4!UBERON:0005742;4.29e-19;4!UBERON:0005734;4.29e-19;4!UBERON:0004664;4.29e-19;4!UBERON:0004663;4.29e-19;4!UBERON:0000947;4.93e-14;21!UBERON:0010191;4.93e-14;21!UBERON:0004573;5.34e-12;33!UBERON:0004571;5.34e-12;33!UBERON:0001529;2.07e-10;2!UBERON:0007204;2.07e-10;2!UBERON:0004237;4.50e-08;10!UBERON:0004695;4.50e-08;10!UBERON:0002111;4.50e-08;10!UBERON:0004178;4.50e-08;10!UBERON:0001637;7.86e-08;42!UBERON:0003509;7.86e-08;42!UBERON:0004572;7.86e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,3.92e-19,4;UBERON:0007240,3.92e-19,4;UBERON:0005742,3.92e-19,4;UBERON:0005734,3.92e-19,4;UBERON:0004664,3.92e-19,4;UBERON:0004663,3.92e-19,4;UBERON:0000947,4.61e-14,21;UBERON:0010191,4.61e-14,21;UBERON:0004573,9.79e-14,33;UBERON:0004571,9.79e-14,33;UBERON:0004797,2.30e-11,7;UBERON:0001637,8.19e-11,42;UBERON:0003509,8.19e-11,42;UBERON:0004572,8.19e-11,42;UBERON:0001529,2.27e-10,2;UBERON:0007204,2.27e-10,2;UBERON:0004237,4.34e-08,10;UBERON:0004695,4.34e-08,10;UBERON:0002111,4.34e-08,10;UBERON:0004178,4.34e-08,10;UBERON:0007500,1.04e-07,59;UBERON:0001981,1.04e-07,59;UBERON:0004537,1.04e-07,59;UBERON:0006965,1.04e-07,59;UBERON:0004872,1.22e-07,83 | |||
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| ||
|short_description=p@chr3:170415945..170415962,+ | |||
}} | }} |
Latest revision as of 18:11, 29 July 2015
Short description: | p@chr3:170415945..170415962, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:170415945..170415962, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 3.92e-19 | 4 |
fibroblast of the aortic adventitia | 3.92e-19 | 4 |
central nervous system pericyte | 1.72e-10 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 2.27e-10 | 2 |
aortic smooth muscle cell | 4.34e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
artery wall | 3.92e-19 | 4 |
tunica adventitia of artery | 3.92e-19 | 4 |
adventitia | 3.92e-19 | 4 |
tunica adventitia of blood vessel | 3.92e-19 | 4 |
aorta tunica adventitia | 3.92e-19 | 4 |
aorta wall | 3.92e-19 | 4 |
aorta | 4.61e-14 | 21 |
aortic system | 4.61e-14 | 21 |
systemic artery | 9.79e-14 | 33 |
systemic arterial system | 9.79e-14 | 33 |
blood vessel layer | 2.30e-11 | 7 |
artery | 8.19e-11 | 42 |
arterial blood vessel | 8.19e-11 | 42 |
arterial system | 8.19e-11 | 42 |
brachiocephalic artery | 2.27e-10 | 2 |
brachiocephalic vasculature | 2.27e-10 | 2 |
blood vessel smooth muscle | 4.34e-08 | 10 |
arterial system smooth muscle | 4.34e-08 | 10 |
artery smooth muscle tissue | 4.34e-08 | 10 |
aorta smooth muscle tissue | 4.34e-08 | 10 |
epithelial tube open at both ends | 1.04e-07 | 59 |
blood vessel | 1.04e-07 | 59 |
blood vasculature | 1.04e-07 | 59 |
vascular cord | 1.04e-07 | 59 |
splanchnic layer of lateral plate mesoderm | 1.22e-07 | 83 |